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pwwang / packages

Package Name Access Summary Updated
r-plotthis public plotthis is an R package that is built upon ggplot2 and other plotting packages. 2026-01-28
r-scplotter public provides a set of functions to visualize single-cell sequencing data in an easy and efficient way. 2026-01-27
r-biopipen.utils public Common utility R functions for biopipen processes. 2026-01-25
r-aneuploidyscore public R package to calculate the Aneuploidy Score from Chromosome Arm-level SCNAs/Aneuploidies (CAAs) as outlined and expanded by Shukla et al. 2026-01-17
bioconductor-motifbreakr public A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites 2026-01-17
r-bsicons public An R package for using Bootstrap icons in Shiny and R Markdown 2026-01-17
r-gsea_r public Copyright © 2003-2019 The Broad Institute, Inc., Massachusetts Institute of Technology and Regents of the University of California. All rights reserved. 2026-01-17
r-ggradar public This package exports the functionality of ggplot2 to create radar charts. 2026-01-17
r-sccatch public Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data. 2026-01-17
r-seuratdata public SeuratData is a mechanism for distributing datasets in the form of Seurat objects using R's internal package and data management systems. 2026-01-17
r-enrichit public Gene Set Over-Representation Enrichment Analysis. 2026-01-17
bioconductor-destiny public Creates diffusion maps 2026-01-17
r-hitype public Hierarchical and high-resolution cell-type identification for single-cell RNA-seq data based on ScType. 2026-01-16
r-gglogger public Logs the calls used to create ggplot2 objects. 2026-01-12
bioconductor-data-packages public A package to enable downloading and installation of Bioconductor data packages 2026-01-12
bioconductor-screpertoire public A toolkit for single-cell immune profiling 2026-01-10
bioconductor-scdblfinder public scDblFinder 2025-11-26
r-seuratwrappers public SeuratWrappers is a collection of community-provided methods and extensions for Seurat, curated by the Satija Lab at NYGC. These methods comprise functionality not presently found in Seurat, and are able to be updated much more frequently. 2025-11-26
bioconductor-ggmanh public Visualization Tool for GWAS Result 2025-11-26
clustcr public a python interface for rapid clustering of large sets of CDR3 sequences 2025-11-26
r-ggrastr public Rasterize only specific layers of a ggplot2 plot (for instance, large scatter plots with many points) while keeping all labels and text in vector format. This allows users to keep plots within a reasonable size limit without losing the vector properties of scale-sensitive information. 2025-06-27
r-doubletfinder public DoubletFinder is an R package that predicts doublets in single-cell RNA sequencing data. 2025-06-27
r-bracer public Performs brace expansions on strings. Made popular by Unix shells, brace expansion allows users to concisely generate certain character vectors by taking a single string and (recursively) expanding the comma-separated lists and double-period-separated integer and character sequences enclosed within braces in that string. The double-period-separated numeric integer expansion also supports padding the resulting numbers with zeros. 2025-06-27
r-tidyprompt public Create LLM prompting pipelines 2025-04-25
bioconductor-gdsfmt public R Interface to CoreArray Genomic Data Structure (GDS) files 2025-03-25

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