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paul.martin-2 / packages / r-sctransform 0.3.2

A normalization method for single-cell UMI count data using a variance stabilizing transformation. The transformation is based on a negative binomial regression model with regularized parameters. As part of the same regression framework, this package also provides functions for batch correction, and data correction. See Hafemeister and Satija 2019 <doi:10.1186/s13059-019-1874-1> for more details.

Installers

  • linux-64 v0.3.2

conda install

To install this package run one of the following:
conda install paul.martin-2::r-sctransform

Description


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