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olcbioinformatics / packages / vsnp 0.0.20

vSNP - bacterial validation SNP analysis tool

Installers

  • noarch v0.0.20

conda install

To install this package run one of the following:
conda install olcbioinformatics::vsnp

Description

USDA APHIS Veterinary Services (VS) Mycobacterium tuberculosis complex, mainly M. bovis, and Brucella sp. SNP pipeline. Genotyping from whole genome sequence (WGS) outputting BAM, VCF, SNP tables and phylogentic trees.

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