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modkit
|
public |
A toolkit for working with modified-base data stored within BAM files.
|
2025-03-27 |
|
pod5
|
public |
POD5 is a file format for storing nanopore dna data in an easily accessible way. The format is able to be written in a streaming manner which allows a sequencing instrument to directly write the format.
|
2025-03-25 |
|
medaka
|
public |
Neural network sequence error correction.
|
2025-03-25 |
|
np-artic
|
public |
No Summary
|
2025-03-25 |
|
ont-spectre
|
public |
Oxford Nanopore Technologies Plc. fork of Spectre CNV caller
|
2025-03-25 |
|
longphase
|
public |
LongPhase is an ultra-fast program for simultaneously co-phasing SNPs, small indels, large SVs, and (5mC) modifications for Nanopore and PacBio platforms.
|
2025-03-25 |
|
perl-io-compress
|
public |
IO Interface to compressed data files/buffers
|
2025-03-25 |
|
perl-compress-raw-bzip2
|
public |
Low-Level Interface to bzip2 compression library
|
2025-03-25 |
|
perl-compress-raw-zlib
|
public |
Basic utilities for writing tests.
|
2025-03-25 |
|
perl-json-xs
|
public |
JSON serialising/deserialising, done correctly and fast
|
2025-03-25 |
|
whatshap
|
public |
phase genomic variants using DNA sequencing reads (haplotype assembly)
|
2025-03-25 |
|
time
|
public |
time command from GNU
|
2025-03-25 |
|
perl-params-validate
|
public |
Validate method/function parameters
|
2025-03-25 |
|
perl-encode
|
public |
character encodings in Perl
|
2025-03-25 |
|
xopen
|
public |
Open compressed files transparently in Python
|
2025-03-25 |
|
perl-data-dumper
|
public |
seeds germane, yet not germinated
|
2025-03-25 |
|
perl-list-moreutils-xs
|
public |
Provide the stuff missing in List::Util in XS
|
2025-03-25 |
|
perl-pathtools
|
public |
Tools for working with directory and file names
|
2025-03-25 |
|
perl-storable
|
public |
persistence for Perl data structures
|
2025-03-25 |
|
perl-version
|
public |
Structured version objects
|
2025-03-25 |
|
perl-gd
|
public |
Perl interface to the gd2 graphics library
|
2025-03-25 |
|
perl-scalar-list-utils
|
public |
Common Scalar and List utility subroutines
|
2025-03-25 |
|
perl-time-hires
|
public |
High resolution alarm, sleep, gettimeofday, interval timers
|
2025-03-25 |
|
perl-extutils-constant
|
public |
generate XS code to import C header constants
|
2025-03-25 |
|
perl-clone
|
public |
recursively copy Perl datatypes
|
2025-03-25 |
