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jitendralab / packages

Package Name Access Summary Updated
r-syntenyplotter public Draw syntenic relationships between genome assemblies. There are 3 functions which take a tab delimited file containing alignment data for syntenic blocks between genomes to produce either a linear alignment plot, an evolution highway style plot, or a painted ideogram representing syntenic relationships. There is also a function to convert alignment data in the DESCHRAMBLER/inferCAR format to the required data structure. 2026-02-13
crossroad public No Summary 2026-02-08
regis public REGIS v1.0.5 - RNA-seq Guided Identification System for lncRNA Discovery (Go implementation) 2025-12-15
arbo public No Summary 2025-09-17
cpc2_standalone public CPC2: A fast and accurate coding potential calculator based on sequence intrinsic features. 2025-08-22
perf_ssr public PERF is a Python package for fast and accurate identification of microsatellites from DNA sequences 2025-03-25

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