| Package Name | Access | Summary | Updated |
|---|---|---|---|
| oasa | public | OASA is a free cheminformatics library written in Python | 2025-03-25 |
| bkchem | public | BKChem is a free molecular drawing program | 2025-03-25 |
| tangram_taladraw | public | UCSF Chimera extension to build 3D structures out of two-dimensional sketches | 2025-03-25 |
| tangram | public | A collection of molecular modelling tools for UCSF Chimera | 2025-03-25 |
| tangram_qmsetup | public | QM and QM/MM calculations setup for UCSF Chimera | 2025-03-25 |
| libtangram | public | Common code for all Tangram extensions | 2025-03-25 |
| gaudiview | public | UCSF Chimera extension to explore and analyze GaudiMM & GOLD solutions | 2025-03-25 |
| tangram_vinarelaunch | public | Easily relaunch failed AutoDock Vina OPAL jobs from UCSF Chimera | 2025-03-25 |
| tangram_subalign | public | Use RDKit to align small molecules in UCSF Chimera | 2025-03-25 |
| tangram_snfg | public | 3D implementation of The Symbol Nomenclature For Glycans (SNFG) for UCSF Chimera | 2025-03-25 |
| tangram_selection | public | Experimental Tk widget to select items in UCSF Chimera a la Excel | 2025-03-25 |
| tangram_propkagui | public | UCSF Chimera extension to depict PropKa 3.1 results | 2025-03-25 |
| tangram_popmusicgui | public | Depict and apply the predictions made by PoPMuSiC calculations in UCSF Chimera | 2025-03-25 |
| tangram_orbitraj | public | Modification of UCSF Chimera's MD Movie extension to play volumetric data | 2025-03-25 |
| tangram_normalmodes | public | An UCSF Chimera interface to perform Normal Mode Analysis (NMA) with ProDy | 2025-03-25 |
| tangram_nciplot | public | UCSF Chimera extension to run and visualize NCIPlot calculations | 2025-03-25 |
| tangram_mmsetup | public | Setup MD calculations with OpenMM and ommprotocol | 2025-03-25 |
| tangram_dummyatoms | public | Easy to prepare MD inputs for metal systems | 2025-03-25 |
| tangram_cauchian | public | QM and QM/MM calculations setup for UCSF Chimera | 2025-03-25 |
| tangram_bondorder | public | Bond order perception extension for UCSF Chimera | 2025-03-25 |
| prody | public | A Python Package for Protein Dynamics Analysis | 2025-03-25 |
| propka | public | pKa predictions for 3D structures | 2025-03-25 |
| tkintertable | public | Extendable table class for Tkinter | 2025-03-25 |
| drugscorex | public | A Knowledge-Based Scoring Function for the Assessment of Protein–Ligand Complexes (article: https://pubs.acs.org/doi/abs/10.1021/ci200274q) | 2025-03-25 |
| nwchem | public | Open Source High-Performance Computational Chemistry [BROKEN build! Use your distro package manager in the meantime] | 2025-03-25 |
