| Package Name | Access | Summary | Updated |
|---|---|---|---|
| freebayes | public | Bayesian haplotype-based polymorphism discovery and genotyping | 2025-03-25 |
| trimmomatic | public | A flexible read trimming tool for Illumina NGS data | 2025-03-25 |
| bwa | public | The BWA read mapper. | 2025-03-25 |
| bedtools | public | A swiss army knife for genome arithmetic. https://github.com/arq5x/bedtools2 | 2025-03-25 |