| Package Name | Access | Summary | Updated |
|---|---|---|---|
| freesasa-cli | public | Calculate solvent accessible surface areas of proteins | 2025-03-25 |
| juicer | public | A One-Click System for Analyzing Loop-Resolution Hi-C Experiments. | 2025-03-25 |
| modflow-2005 | public | Three-dimensional finite-difference ground-water flow model. | 2025-03-25 |
| poplddecay | public | Fast and effective tool for linkage disequilibrium decay analysis. | 2025-03-25 |
| tensorboard-plugin-profile | public | A profiling and performance analysis tool for TensorFlow. | 2025-03-25 |
| gviz-api | public | Python API for Google Visualization | 2025-03-25 |
| togl | public | A Tcl/Tk widget for OpenGL rendering. | 2025-03-25 |
| boa-bacfinder | public | Find bacteriocins in bacterial genomes | 2025-03-25 |
| deepemhancer | public | Deep learning for cryo-EM maps post-processing. | 2025-03-25 |
| tpg | public | Toy Parser Generator is a lexical and syntactic parser generator for Python. | 2025-03-25 |
| pysages | public | Python Suite for Advanced General Ensemble Simulations. | 2025-03-25 |
| libmcfp | public | A header only library that can collect configuration options from command line arguments and configuration files. | 2025-03-25 |
| psipred | public | The PSIPRED Workbench provides a range of protein structure prediction methods. | 2025-03-25 |
| consurf | public | Stand Alone version of ConSurf | 2025-03-25 |
| jmodeltest | public | jModelTest is a tool to carry out statistical selection of best-fit models of nucleotide substitution. | 2025-03-25 |
| prottest3 | public | ProtTest is a bioinformatic tool for the selection of best-fit models of aminoacid replacement for the data at hand. | 2025-03-25 |
| dorado | public | Dorado is a high-performance, easy-to-use, open source basecaller for Oxford Nanopore reads. | 2025-03-25 |
| subversion | public | Enterprise-class centralized version control for the masses | 2025-03-25 |
| bidscoin | public | Converts and organises raw MRI data-sets according to the Brain Imaging Data Structure (BIDS). | 2025-03-25 |
| phys2bids | public | Python library to convert physiological data files into BIDS format. | 2025-03-25 |
| bioread | public | Libraries for reading BIOPAC files. | 2025-03-25 |
| pypet2bids | public | A python implementation of an ECAT to BIDS converter. | 2025-03-25 |
| json-maj | public | Updates Jsons w/ json, key pair, or entire dictionary as arguments. | 2025-03-25 |
| multiecho | public | Combine multi-echoes from a multi-echo fMRI acquisition. | 2025-03-25 |
| pydeface | public | A tool to remove facial structure from MRI images. | 2025-03-25 |
