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ashs
|
public |
ASHS is software for automatic segmentation of the medial temporal lobe (MTL) substructures from brain MRI scans.
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2025-03-25 |
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shtns
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public |
SHTns is a high performance library for Spherical Harmonic Transform written in C, aimed at numerical simulation (fluid flows, mhd, ...) in spherical geometries.
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2025-03-25 |
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gurobi-matlab
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public |
MATLAB files for Gurobi optimizer.
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2025-03-25 |
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nquire
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public |
A statistical framework for ploidy estimation using NGS short-read data.
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2025-03-25 |
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bidscoin
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public |
Converts and organises raw MRI data-sets according to the Brain Imaging Data Structure (BIDS).
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2025-03-25 |
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phys2bids
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public |
Python library to convert physiological data files into BIDS format.
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2025-03-25 |
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bioread
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public |
Libraries for reading BIOPAC files.
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2025-03-25 |
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pypet2bids
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public |
A python implementation of an ECAT to BIDS converter.
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2025-03-25 |
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json-maj
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public |
Updates Jsons w/ json, key pair, or entire dictionary as arguments.
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2025-03-25 |
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multiecho
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public |
Combine multi-echoes from a multi-echo fMRI acquisition.
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2025-03-25 |
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pydeface
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public |
A tool to remove facial structure from MRI images.
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2025-03-25 |
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etelemetry
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public |
A lightweight python client to communicate with the etelemetry server.
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2025-03-25 |
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git
|
public |
distributed version control system
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2025-03-25 |
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popoolation2
|
public |
PoPoolation2 allows to compare allele frequencies for SNPs between two or more populations and to identify significant differences.
|
2025-03-25 |
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t-coffee
|
public |
A collection of tools for Multiple Alignments of DNA, RNA, Protein Sequence
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2025-03-25 |
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nomad
|
public |
NOMAD is an unsupervised and reference-free unifying framework to discover regulated sequence variation through statistical analysis of k-mer composition in both DNA and RNA sequence.
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2025-03-25 |
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blobtoolkit
|
public |
Interactive quality assessment of genome assemblies.
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2025-03-25 |
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blobtk
|
public |
Core functionality shared across BlobToolKit tools.
|
2025-03-25 |
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chromedriver-binary-auto
|
public |
Installer for chromedriver.
|
2025-03-25 |
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geckodriver-autoinstaller
|
public |
Automatically install geckodriver that supports the currently installed version of chrome.
|
2025-03-25 |
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python-blobtk
|
public |
Core functionality shared across BlobToolKit tools.
|
2025-03-25 |
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mgblast
|
public |
fast all-vs-all DNA alignment tool, modification of megablast from a 2006 version of NCBI C Toolkit
|
2025-03-25 |
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sparta
|
public |
Stochastic PArallel Rarefied-gas Time-accurate Analyzer.
|
2025-03-25 |
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cgmaptools
|
public |
Command-line Toolset for Bisulfite Sequencing Data Analysis
|
2025-03-25 |
|
tf-comb
|
public |
Transcription Factor Co-Occurrence using Market Basket analysis
|
2025-03-25 |
