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ksnp
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public |
kSNP identifies the pan-genome SNPs in a set of genome sequences, and estimates phylogenetic trees based upon those SNPs.
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2025-03-25 |
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mbuffer
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public |
mbuffer is a tool for buffering data streams with a large set of unique features
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2025-03-25 |
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cabal-install
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public |
The cabal-install package provides the cabal command-line tool which simplifies the process of managing Haskell software by automating the fetching, configuration, compilation and installation of Haskell libraries and programs.
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2025-03-25 |
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quasr
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public |
QUASR is lightweight pipeline for processing and analysis of high-throughput sequencing data.
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2025-03-25 |
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stack
|
public |
Stack is a cross-platform program for developing Haskell projects.
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2025-03-25 |
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magic
|
public |
MAGIC: A diffusion-based imputation method reveals gene-gene interactions in single-cell RNA-sequencing data
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2025-03-25 |
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dm-sonnet
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public |
Sonnet is a library built on top of TensorFlow for building complex neural networks.
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2025-03-25 |
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lftp
|
public |
LFTP is a sophisticated file transfer program supporting a number of network protocols (ftp, http, sftp, fish, torrent).
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2025-03-25 |
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age
|
public |
a tools that implements an algorithm for optimal alignment of sequences with structural variants (SVs)
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2025-03-25 |
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jvarkit-sam2tsv
|
public |
Prints the SAM alignments as a TAB delimited file.
|
2025-03-25 |
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plinkseq
|
public |
PLINK/SEQ is an open-source C/C++ library for working with human genetic variation data.
|
2025-03-25 |
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beta
|
public |
Binding and Expression Target Analysis (BETA) is a software package that integrates ChIP-seq of transcription factors or chromatin regulators with differential gene expression data to infer direct target genes.
|
2025-03-25 |
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r-regresshaplo
|
public |
This package reconstructs haplotypes from a BAM file using a penalized regression approach.
|
2025-03-25 |
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globus-cli
|
public |
Globus CLI
|
2025-03-25 |
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globus-sdk
|
public |
Globus SDK for Python
|
2025-03-25 |
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abayesqr
|
public |
aBayesQR is a viral quasispecies reconstruction algorithm that employs a maximum-likelihood framework to infer individual sequences in a mixture from high-throughput sequencing data.
|
2025-03-25 |
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chipathlon-client
|
public |
No Summary
|
2025-03-25 |
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svmerge
|
public |
No Summary
|
2025-03-25 |
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cnd
|
public |
No Summary
|
2025-03-25 |
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chipathlon
|
public |
No Summary
|
2025-03-25 |
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phantompeakqualtools
|
public |
No Summary
|
2025-03-25 |
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pymeanshift
|
public |
No Summary
|
2025-03-25 |
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r-depmixs4
|
public |
No Summary
|
2025-03-25 |
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bosco
|
public |
No Summary
|
2025-03-25 |
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mxnet
|
public |
No Summary
|
2025-03-25 |
|
python-mxnet
|
public |
No Summary
|
2025-03-25 |
|
r-mxnet
|
public |
No Summary
|
2025-03-25 |
|
r-viridis
|
public |
No Summary
|
2025-03-25 |
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r-visnetwork
|
public |
No Summary
|
2025-03-25 |
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r-viridislite
|
public |
No Summary
|
2025-03-25 |
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hiddendomains
|
public |
hiddenDomains is a suite of programs used to identify significant enrichment of ChIP-seq reads that span large domains.
|
2025-03-25 |
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pegasus-wms
|
public |
Pegasus WMS is a configurable system for mapping and executing scientific workflows over a wide range of computational infrastructures including laptops, campus clusters, supercomputers, grids, and commercial and academic clouds.
|
2025-03-25 |
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jbio
|
public |
No Summary
|
2025-03-25 |
|
zerone
|
public |
No Summary
|
2025-03-25 |
|
r-zerone
|
public |
No Summary
|
2025-03-25 |
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music
|
public |
No Summary
|
2025-03-25 |
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tensorflow-fma
|
public |
Computation using data flow graphs for scalable machine learning.
|
2025-03-25 |
|
tensorflow-cpucompat
|
public |
Computation using data flow graphs for scalable machine learning.
|
2025-03-25 |
|
parcel
|
public |
A high performance HTTP download client that leverages the speed of UDP without sacrificing reliability.
|
2025-03-25 |
|
tensorflow
|
public |
TensorFlow is a machine learning library.
|
2025-03-25 |
|
intervaltree
|
public |
No Summary
|
2025-03-25 |
|
pyinstaller
|
public |
PyInstaller is a program that freezes (packages) Python programs into stand-alone executables, under Windows, Linux, Mac OS X, FreeBSD, Solaris and AIX.
|
2025-03-25 |
|
snp-pipeline
|
public |
Script and functions for SNP matrix construction
|
2025-03-25 |
|
macrodensity
|
public |
A python script to read in a VASP LOCPOT file and plots the electrostatic potential in a number of ways. Plots: Planar average. Spherical average. Atom centred averages (requires Atomistic Simulations Environment).
|
2025-03-25 |
|
ase
|
public |
Atomic Simulation Environment
|
2025-03-25 |
|
pymeteo
|
public |
General meteorological routines, skew-T/log-p plotting and working with CM1 model data.
|
2025-03-25 |
|
gem
|
public |
GEM: High resolution peak calling and motif discovery for ChIP-seq and ChIP-exo data
|
2025-03-25 |
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xvidcore
|
public |
Xvid is a high performance and high quality MPEG-4 video de-/encoding solution.
|
2025-03-25 |
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libvpx
|
public |
This package, from the WebM project, provides the reference implementations of the VP8 Codec, used in most current html5 video, and of the next-generation VP9 Codec.
|
2025-03-25 |
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vo-amrwbenc
|
public |
VisualOn AMR-WB encoder library
|
2025-03-25 |
