scrappie
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public |
Scrappie is a technology demonstrator for the Oxford Nanopore Research Algorithms group
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2025-03-25 |
argp-standalone
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public |
Standalone version of arguments parsing functions from GLIBC.
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2025-03-25 |
miniasm
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public |
Ultrafast de novo assembly for long noisy reads (though having no consensus step)
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2025-03-25 |
fast5-research
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public |
ONT Research fast5 read/write package
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2025-03-25 |
aiozmq
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public |
ZeroMQ integration with asyncio.
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2025-03-25 |
jvarkit-msa2vcf
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public |
Getting a VCF file from a CLUSTAW or a FASTA alignment.
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2025-03-25 |
phylosnp
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public |
PhyloSNP: An automated generator of phylogenetic trees from SNP data.
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2025-03-25 |
tensorflow-tensorboard
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public |
TensorBoard lets you watch Tensors Flow
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2025-03-25 |
idba
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public |
IDBA is a practical iterative De Bruijn Graph De Novo Assembler for sequence assembly in bioinformatics.
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2025-03-25 |
ksnp
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public |
kSNP identifies the pan-genome SNPs in a set of genome sequences, and estimates phylogenetic trees based upon those SNPs.
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2025-03-25 |
mbuffer
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public |
mbuffer is a tool for buffering data streams with a large set of unique features
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2025-03-25 |
cabal-install
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public |
The cabal-install package provides the cabal command-line tool which simplifies the process of managing Haskell software by automating the fetching, configuration, compilation and installation of Haskell libraries and programs.
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2025-03-25 |
quasr
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public |
QUASR is lightweight pipeline for processing and analysis of high-throughput sequencing data.
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2025-03-25 |
stack
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public |
Stack is a cross-platform program for developing Haskell projects.
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2025-03-25 |
magic
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public |
MAGIC: A diffusion-based imputation method reveals gene-gene interactions in single-cell RNA-sequencing data
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2025-03-25 |
readline
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public |
library for editing command lines as they are typed in
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2025-03-25 |
dm-sonnet
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public |
Sonnet is a library built on top of TensorFlow for building complex neural networks.
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2025-03-25 |
lftp
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public |
LFTP is a sophisticated file transfer program supporting a number of network protocols (ftp, http, sftp, fish, torrent).
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2025-03-25 |
age
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public |
a tools that implements an algorithm for optimal alignment of sequences with structural variants (SVs)
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2025-03-25 |
jvarkit-sam2tsv
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public |
Prints the SAM alignments as a TAB delimited file.
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2025-03-25 |
plinkseq
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public |
PLINK/SEQ is an open-source C/C++ library for working with human genetic variation data.
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2025-03-25 |
beta
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public |
Binding and Expression Target Analysis (BETA) is a software package that integrates ChIP-seq of transcription factors or chromatin regulators with differential gene expression data to infer direct target genes.
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2025-03-25 |
r-regresshaplo
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public |
This package reconstructs haplotypes from a BAM file using a penalized regression approach.
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2025-03-25 |
globus-cli
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public |
Globus CLI
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2025-03-25 |
globus-sdk
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public |
Globus SDK for Python
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2025-03-25 |