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fastq-screen
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public |
FastQ Screen allows you to screen a library of sequences in FastQ format against a set of sequence databases so you can see if the composition of the library matches with what you expect
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2025-03-25 |
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sjaracne
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public |
SJARACNe is a scalable solution of ARACNe that dramatically improves the computational performance.
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2025-03-25 |
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cite-seq-count
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public |
CITE-seq-Count is a program that outputs umi and read counts from raq fastq CITE-seq or hashing data.
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2025-03-25 |
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pytest-dependency
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public |
Manage dependencies of tests
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2025-03-25 |
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r-cepa
|
public |
Centrality-based pathway enrichment
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2025-03-25 |
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vcftoolz
|
public |
Tools for working with Variant Call Format files.
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2025-03-25 |
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imsindel
|
public |
An accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split read analysis
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2025-03-25 |
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pblat
|
public |
parallelized blat with multi-threads support
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2025-03-25 |
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igv
|
public |
Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations
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2025-03-25 |
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academic-keyword-occurrence
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public |
This script extracts the historic word occurrence of a search term in academic papers (from Google Scholar). It allows for spotting trends in research and analyzing the relevance of a topic over time.
|
2025-03-25 |
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jvarkit-bam2svg
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public |
BAM to Scalar Vector Graphics (SVG)
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2025-03-25 |
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jvarkit-bam2wig
|
public |
Bam to fixedStep Wiggle converter, or BED GRAPH.
|
2025-03-25 |
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plantuml
|
public |
PlantUML is a component that allows to quickly write UML and non-UML diagrams.
|
2025-03-25 |
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danpos
|
public |
A toolkit for Dynamic Analysis of Nucleosome and Protein Occupancy by Sequencing, version 2.
|
2025-03-25 |
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r-greatr
|
public |
Gene Ontology enrichment analysis visualization for multiple samples using GREAT API.
|
2025-03-25 |
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sample
|
public |
A memory-efficient alternative to shuf for sampling in huge files.
|
2025-03-25 |
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hmmlearn
|
public |
Hidden Markov Models in Python, with scikit-learn like API
|
2025-03-25 |
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r-pasha
|
public |
Preprocessing of Aligned Sequences from HTS Analyses.
|
2025-03-25 |
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pygtftk
|
public |
The gtftk suite providing facilities to manipulate genomic annotations in gtf format.
|
2025-03-25 |
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bioconductor-deseq2
|
public |
No Summary
|
2025-03-25 |
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r-locfit
|
public |
No Summary
|
2025-03-25 |
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r-catools
|
public |
No Summary
|
2025-03-25 |
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bioconductor-genefilter
|
public |
No Summary
|
2025-03-25 |
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r-ggrepel
|
public |
No Summary
|
2025-03-25 |
