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r-cytonorm

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This package can be used to normalize cytometry samples when a control sample is taken along in each of the batches. This is done by first identifying multiple clusters/cell types, learning the batch effects from the control samples and applying quantile normalization on all markers of interest.

Installation

To install this package, run one of the following:

Conda
$conda install genomedk::r-cytonorm

Usage Tracking

0.0.17
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Downloads (Last 6 months): 0

About

Summary

This package can be used to normalize cytometry samples when a control sample is taken along in each of the batches. This is done by first identifying multiple clusters/cell types, learning the batch effects from the control samples and applying quantile normalization on all markers of interest.

Last Updated

Jul 6, 2023 at 11:34

License

GPL-2

Total Downloads

19

Supported Platforms

linux-64