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etetoolkit / packages

Package Name Access Summary Updated
clustalo public No Summary 2023-06-16
muscle public No Summary 2023-06-16
ete_toolchain public No Summary 2023-06-16
slr public No Summary 2023-06-16
t_coffee public No Summary 2023-06-16
paml public No Summary 2023-06-16
dialigntx public No Summary 2023-06-16
kalign public No Summary 2023-06-16
phylobayes public No Summary 2023-06-16
fasttree public No Summary 2023-06-16
iqtree public No Summary 2023-06-16
trimal public No Summary 2023-06-16
pmodeltest public No Summary 2023-06-16
raxml public No Summary 2023-06-16
mafft public No Summary 2023-06-16
phyml public No Summary 2023-06-16
ete3 public A Python framework for reconstructing, analysing and visualizing phylogenetic trees and multiple sequence alignments. Includes Python API and Phylogenomic tools 2023-06-16
ete3_external_apps public A collection of third-party precompiled open source phylogenetic tools used by the etetoolkit (ete3 build/evol). Includes: FastTree, RAxML, Phyml, Trimal, Pmodeltest, T-Coffee, M-Coffee, Kaling, Prank, Probcons, Muscle, ClustalOmega, Dialign-tx, Mafft, Consel, SLR and Codeml. Source code used at https://github.com/etetoolkit/ext_apps 2023-06-16
argtable2 public argtable2 provides a library required by ClustalOmega 2023-06-16
ete2 public A Python framework for the analysis and visualization of trees. 2023-06-16

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