# create conda environment
$ mamba env create -f env.yml

# update conda environment
$ mamba env update -n pipseq --file env.yml

pip install -e .

 conda environment
$ conda activate pipseq

# make sure the pipseq package is installed in development mode
$ pip install -e .

# make changes under nbs/ directory
# ...

# compile to have changes apply to the pipseq package
$ nbdev_prepare

# publish to pypi
$ nbdev_pypi

# publish to conda
$ nbdev_conda --build_args '-c conda-forge'
$ nbdev_conda --mambabuild --build_args '-c conda-forge -c dsm-72'

$ pip install git+https://github.com/dsm-72/pipseq.git

$ conda install -c dsm-72 pipseq

$ pip install pipseq