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parallel-disk-usage
|
public |
Highly parallelized, blazing fast directory tree analyzer
|
2025-07-23 |
|
reditools3
|
public |
A new REDItools implementation to speed-up the RNA editing profiling in massive RNAseq data
|
2025-07-23 |
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alphagenome
|
public |
A Python SDK for interacting and visualizing genomic models.
|
2025-07-22 |
|
cdxgen
|
public |
Creates CycloneDX Software Bill of Materials (SBOM) from source or container image
|
2025-07-11 |
|
pacvim
|
public |
Learn vim commands via a game
|
2025-07-09 |
|
enformer-pytorch
|
public |
Enformer - Pytorch
|
2025-06-27 |
|
borzoi-pytorch-gpu
|
public |
The Borzoi model from Linder et al., but in Pytorch
|
2025-06-26 |
|
savemoney
|
public |
Simple Algorithm for Very Efficient Multiplexing of Oxford Nanopore Experiments for You!
|
2025-06-24 |
|
r-metap
|
public |
The canonical way to perform meta-analysis involves using effect sizes. When they are not available this package provides a number of methods for meta-analysis of significance values including the methods of Edgington, Fisher, Lancaster, Stouffer, Tippett, and Wilkinson; a number of data-sets to replicate published
results; and a routine for graphical display.
|
2025-06-19 |
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r-qqconf
|
public |
Provides functionality for creating Quantile-Quantile (QQ) and Probability-Probability
(PP) plots with simultaneous testing bands to asses significance of sample deviation
from a reference distribution <doi:10.18637/jss.v106.i10>.
|
2025-06-19 |
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gmato
|
public |
GMATO : Microsatellite Analyzing Tool for Huge Genome at any size
|
2025-06-14 |
|
cmocka
|
public |
An elegant unit testing framework for C with support for mock objects.
|
2025-06-12 |
|
personalbpnet
|
public |
A small modification to bpnetlite's BPNet to accomodate large validation datasets.
|
2025-06-03 |
|
bpnet-lite
|
public |
bpnet-lite is a minimal implementation of BPNet, a neural network aimed at interpreting regulatory activity of the genome.
|
2025-06-03 |
|
tangermeme
|
public |
Biological sequence analysis for the modern age.
|
2025-06-03 |
|
clipnet
|
public |
A deep learning approach to predicting transcription initiation from sequence at single nucleotide resolution
|
2025-06-03 |
|
silence-tensorflow
|
public |
Simple python package to shut up Tensorflow warnings and logs.
|
2025-06-03 |
|
ipafinder
|
public |
Systematic analyses of intronic polyadenylation from standard RNAseq data
|
2025-06-02 |
|
heroku
|
public |
CLI to interact with Heroku
|
2025-05-29 |
|
borzoi-pytorch
|
public |
The Borzoi model from Linder et al., but in Pytorch
|
2025-05-29 |
|
nanoscope
|
public |
Analysis pipeline for single-cell nano-CUT&Tag data
|
2025-05-20 |
|
fragtk
|
public |
Fragment file toolkit
|
2025-05-20 |
|
rb-nokogiri
|
public |
Nokogiri makes it easy and painless to work with XML and HTML from Ruby. It provides a sensible, easy-to-understand API for reading, writing, modifying, and querying documents.
|
2025-05-18 |
|
rb-ethon
|
public |
Very lightweight libcurl wrapper.
|
2025-05-18 |
|
vagrant
|
public |
Vagrant is a tool for building and distributing virtualized development environments.
|
2025-05-18 |
