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r-blipr
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public |
A Bayesian Linear Program for resolution-adaptive signal detection
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2025-03-25 |
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r-rcbc
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public |
An R interface to the CBC solver for mixed-integer linear programs.
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2025-03-25 |
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r-scalespikeslab
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public |
A scalable Gibbs sampling implementation for high dimensional Bayesian regression
with the continuous spike-and-slab prior. Niloy Biswas, Lester Mackey and Xiao-Li
Meng, "Scalable Spike-and-Slab" (2022) <arXiv:2204.01668>.
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2025-03-25 |
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r-truncatednormal
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public |
A collection of functions to deal with the truncated univariate and multivariate normal
and Student distributions, described in Botev (2017) <doi:10.1111/rssb.12162> and
Botev and L'Ecuyer (2015) <doi:10.1109/WSC.2015.7408180>.
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2025-03-25 |
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r-nprior
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public |
We develop a unified and flexible Bayesian shrinkage procedure called "Neuronized Priors".
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2025-03-25 |
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r-immunelens
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public |
Immune Lymphocyte Estimation from Nucleotide Sequencing (Immune LENS) is an R package to calculate T and B cell fractions from WGS or WES data from hg19 or hg38 aligned genomes. Includes functions from TcellExTRECT package for support of WES analysis.
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2025-03-25 |
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r-restriktor
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public |
Allow for easy-to-use testing or evaluating of linear equality and inequality restrictions
about parameters and effects in (generalized) linear statistical models.
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2025-03-25 |
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chrombpnet-variant-scorer
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public |
A framework to score and analyze variant effects genome-wide using ChromBPNet models
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2025-03-25 |
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outrigger
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public |
Outrigger detects *de novo* exons and quantifies their percent spliced-in
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2025-03-25 |
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r-susie.ash
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public |
Variant of Sum of Single Effects (SuSiE) model with support for adaptive shrinkage (ash) prior
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2025-03-25 |
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r-mr.ash.alpha_mccreight
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public |
An R package implementing Mr.ASH method
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2025-03-25 |
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dotnet-interactive
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public |
.NET Interactive combines the power of .NET with many other languages to create notebooks, REPLs, and embedded coding experiences.
|
2025-03-25 |
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lua-magick
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public |
Lua bindings to ImageMagick for LuaJIT using FFI
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2025-03-25 |
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moonscript
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public |
A language that compiles to Lua
|
2025-03-25 |
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lua-alt-getopt
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public |
Lua API for getopt similar to getopt_long(3)
|
2025-03-25 |
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busted
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public |
Elegant Lua unit testing.
|
2025-03-25 |
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lua-term
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public |
Terminal operations for Lua
|
2025-03-25 |
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lua-luasystem
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public |
Platform independent system calls for Lua
|
2025-03-25 |
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lua-penlight
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public |
A set of pure Lua libraries focusing on input data handling (such as reading configuration files), functional programming (such as map, reduce, placeholder expressions,etc), and OS path management.
|
2025-03-25 |
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lua-dkjson
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public |
David Kolf's JSON module for Lua
|
2025-03-25 |
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lua-mediator_lua
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public |
Mediator pattern implementation for pub-sub management
|
2025-03-25 |
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lua-luassert
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public |
Assertion library for Lua
|
2025-03-25 |
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lua-say
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public |
Lua string hashing library, useful for internationalization
|
2025-03-25 |
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lua-cliargs
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public |
Terminal operations for Lua
|
2025-03-25 |
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chrombpnet_old
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public |
Bias factorized, base-resolution deep learning models of chromatin accessibility (chromBPNet)
|
2025-03-25 |
