|
r-argparse
|
public |
No Summary
|
2023-06-16 |
|
sratoolkit
|
public |
The SRA Toolkit and SDK from NCBI is a collection of tools and libraries for using data in the INSDC Sequence Read Archives.
|
2023-06-16 |
|
ucsc-bigbedtobed
|
public |
Convert from bigBed to ascii bed format.
|
2023-06-16 |
|
ucsc-bedgraphtobigwig
|
public |
Convert a bedGraph file to bigWig format.
|
2023-06-16 |
|
ucsc-catdir
|
public |
concatenate files in directory to stdout.
|
2023-06-16 |
|
ucsc-wigtobigwig
|
public |
Convert ascii format wig file (in fixedStep, variableStep
|
2023-06-16 |
|
python-wget
|
public |
pure python download utility
|
2023-06-16 |
|
ucsc-bedtobigbed
|
public |
Convert bed file to bigBed. (BigBed version: 4)
|
2023-06-16 |
|
ucsc-fetchchromsizes
|
public |
used to fetch chrom.sizes information from UCSC
|
2023-06-16 |
|
bleach
|
None |
An easy whitelist-based HTML-sanitizing tool.
|
2023-06-16 |
|
functools32
|
public |
Backport of the functools module from Python 3.2.3 for use on 2.7 and PyPy.
|
2023-06-16 |
|
discover
|
public |
Test discovery for unittest. Backported from Python 2.7 for Python 2.4+
|
2023-06-16 |
|
crossmap
|
public |
Convert genomic coordiates between assemblies
|
2023-06-16 |
|
vcversioner
|
public |
Use version control tags to discover version numbers
|
2023-06-16 |
|
wget
|
public |
pure python download utility
|
2023-06-16 |
|
pysam
|
None |
No Summary
|
2023-06-16 |
|
subread
|
public |
High-performance read alignment, quantification, and mutation discovery
|
2023-06-16 |
|
bedgraphtobigwig
|
None |
No Summary
|
2023-06-16 |
|
sh
|
None |
Python subprocess interface
|
2023-06-16 |
|
bedtobigbed
|
None |
No Summary
|
2023-06-16 |
|
trackhub
|
None |
\nCreate and manage UCSC track hubs from Python\n
|
2023-06-16 |
|
pyaml
|
None |
PyYAML-based module to produce pretty and readable YAML-serialized data
|
2023-06-16 |
|
hubward
|
None |
No Summary
|
2023-06-16 |
|
tabix
|
None |
No Summary
|
2023-06-16 |
|
bedtools
|
None |
A powerful toolset for genome arithmetic.
|
2023-06-16 |
|
pybedtools
|
None |
No Summary
|
2023-06-16 |
|
samtools
|
None |
Tools (written in C using htslib) for manipulating next-generation sequencing data
|
2023-06-16 |
