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globus-compute-endpoint
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public |
Globus Compute: High Performance Function Serving for Science
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2025-09-24 |
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pycurl
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public |
A Python Interface To The cURL library
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2025-09-24 |
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r-xnomial
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public |
Tests whether a set of counts fit a given expected ratio. For example, a genetic cross might be expected to produce four types in the relative frequencies of 9:3:3:1. To see whether a set of observed counts fits this expectation, one can examine all possible outcomes with xmulti() or a random sample of them with xmonte() and find the probability of an observation deviating from the expectation by at least as much as the observed. As a measure of deviation from the expected, one can use the log-likelihood ratio, the multinomial probability, or the classic chi-square statistic. A histogram of the test statistic can also be plotted and compared with the asymptotic curve.
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2025-09-24 |
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r-linkcomm
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public |
Link communities reveal the nested and overlapping structure in networks, and uncover the key nodes that form connections to multiple communities. linkcomm provides a set of tools for generating, visualizing, and analysing link communities in networks of arbitrary size and type. The linkcomm package also includes tools for generating, visualizing, and analysing Overlapping Cluster Generator (OCG) communities.
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2025-09-24 |
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r-assotester
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public |
R package with statistical tests and methods for genetic association studies with emphasis on rare variants and binary (dichotomous) traits
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2025-09-24 |
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r-bc3net
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public |
Implementation of the BC3NET algorithm for gene regulatory network inference (de Matos Simoes and Frank Emmert-Streib, Bagging Statistical Network Inference from Large-Scale Gene Expression Data, PLoS ONE 7(3): e33624, <doi:10.1371/journal.pone.0033624>).
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2025-09-24 |
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r-rvaidememoire
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public |
Contains miscellaneous functions useful in biostatistics, mostly univariate and multivariate testing procedures with a special emphasis on permutation tests. Many functions intend to simplify user's life by shortening existing procedures or by implementing plotting functions that can be used with as many methods from different packages as possible.
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2025-09-24 |
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r-graphicalvar
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public |
Estimates within and between time point interactions in experience sampling data, using the Graphical vector autoregression model in combination with regularization. See also Epskamp, Waldorp, Mottus & Borsboom (2018) <doi:10.1080/00273171.2018.1454823>.
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2025-09-24 |
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r-esquisse
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public |
A 'shiny' gadget to create 'ggplot2' charts interactively with drag-and-drop to map your variables. You can quickly visualize your data accordingly to their type, export to 'PNG' or 'PowerPoint', and retrieve the code to reproduce the chart.
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2025-09-24 |
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safety
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public |
Safety checks your installed dependencies for known security vulnerabilities.
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2025-09-24 |
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r-kknn
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public |
Weighted k-Nearest Neighbors for Classification, Regression and Clustering.
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2025-09-24 |
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r-officedown
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public |
Allows production of 'Microsoft' corporate documents from 'R Markdown' by reusing formatting defined in 'Microsoft Word' documents. You can reuse table styles, list styles but also add column sections, landscape oriented pages. Table and image captions as well as cross-references are transformed into 'Microsoft Word' fields, allowing documents edition and merging without issue with references; the syntax conforms to the 'bookdown' cross-reference definition. Objects generated by the 'officer' package are also supported in the 'knitr' chunks. 'Microsoft PowerPoint' presentations also benefit from this as well as the ability to produce editable vector graphics in 'PowerPoint' and also to define placeholder where content is to be added.
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2025-09-24 |
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r-graphtweets
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public |
Allows building an edge table from data frame of tweets, also provides function to build nodes and another create a temporal graph.
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2025-09-24 |
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r-tidylog
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public |
Provides feedback about 'dplyr' and 'tidyr' operations.
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2025-09-24 |
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pixi-pack
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public |
📦 A toolset to pack and unpack conda environments created with pixi
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2025-09-24 |
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pixi-unpack
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public |
📦 A toolset to pack and unpack conda environments created with pixi
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2025-09-24 |
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r-sqn
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public |
Normalization based a subset of negative control probes as described in 'Subset quantile normalization using negative control features'. Wu Z, Aryee MJ, J Comput Biol. 2010 Oct;17(10):1385-95 [PMID 20976876].
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2025-09-24 |
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r-mgm
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public |
Estimation of k-Order time-varying Mixed Graphical Models and mixed VAR(p) models via elastic-net regularized neighborhood regression. For details see Haslbeck & Waldorp (2020) <doi:10.18637/jss.v093.i08>.
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2025-09-24 |
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syntheseus
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public |
Benchmarking Chemical Synthesis Planning Algorithms
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2025-09-24 |
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syntheseus-viz
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public |
Benchmarking Chemical Synthesis Planning Algorithms
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2025-09-24 |
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r-diffusionmap
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public |
Implements diffusion map method of data parametrization, including creation and visualization of diffusion map, clustering with diffusion K-means and regression using adaptive regression model.
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2025-09-24 |
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r-isingfit
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public |
This network estimation procedure eLasso, which is based on the Ising model, combines l1-regularized logistic regression with model selection based on the Extended Bayesian Information Criterion (EBIC). EBIC is a fit measure that identifies relevant relationships between variables. The resulting network consists of variables as nodes and relevant relationships as edges. Can deal with binary data.
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2025-09-24 |
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lfortran
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public |
Modern interactive LLVM-based Fortran compiler
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2025-09-24 |
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r-data.tree
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public |
Create tree structures from hierarchical data, and traverse the tree in various orders. Aggregate, cumulate, print, plot, convert to and from data.frame and more. Useful for decision trees, machine learning, finance, conversion from and to JSON, and many other applications.
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2025-09-24 |
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r-pedquant
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public |
Provides an interface to access public economic and financial data for economic research and quantitative analysis. The data sources including NBS, FRED, 163, Sina, Eastmoney and etc. It also provides quantitative functions for trading strategies based on the 'data.table', 'TTR', 'PerformanceAnalytics' and etc packages.
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2025-09-24 |
