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A toolkit for working with Biological Observation Matrix ('BIOM') files. Features include reading/writing all 'BIOM' formats, rarefaction, alpha diversity, beta diversity (including 'UniFrac'), summarizing counts by taxonomic level, and sample subsetting. Standalone functions for reading, writing, and subsetting phylogenetic trees are also provided. All CPU intensive operations are encoded in C with multi-thread support.

copied from cf-post-staging / r-rbiom
Type Size Name Uploaded Downloads Labels
conda 1.6 MB | osx-arm64/r-rbiom-2.2.1-r45hc1cd577_1.conda  3 months and 12 days ago 57 main
conda 1.6 MB | osx-arm64/r-rbiom-2.2.1-r44hc1cd577_1.conda  3 months and 12 days ago 162 main
conda 1.6 MB | osx-64/r-rbiom-2.2.1-r44ha730edb_1.conda  3 months and 12 days ago 96 main
conda 1.6 MB | osx-64/r-rbiom-2.2.1-r45ha730edb_1.conda  3 months and 12 days ago 63 main
conda 1.6 MB | linux-aarch64/r-rbiom-2.2.1-r44h08b74da_1.conda  3 months and 12 days ago 73 main
conda 1.6 MB | linux-ppc64le/r-rbiom-2.2.1-r44hb6fba7b_1.conda  3 months and 12 days ago 28 main
conda 1.6 MB | linux-aarch64/r-rbiom-2.2.1-r45h08b74da_1.conda  3 months and 12 days ago 57 main
conda 1.6 MB | linux-64/r-rbiom-2.2.1-r44h3697838_1.conda  3 months and 12 days ago 1915 main
conda 1.6 MB | linux-64/r-rbiom-2.2.1-r45h3697838_1.conda  3 months and 12 days ago 290 main
conda 1.5 MB | osx-arm64/r-rbiom-2.2.1-r43h31118f2_0.conda  6 months and 10 days ago 59 main
conda 1.5 MB | osx-64/r-rbiom-2.2.1-r43h2711daa_0.conda  6 months and 10 days ago 61 main
conda 1.6 MB | osx-arm64/r-rbiom-2.2.1-r44h31118f2_0.conda  6 months and 10 days ago 113 main
conda 1.6 MB | osx-64/r-rbiom-2.2.1-r44h2711daa_0.conda  6 months and 10 days ago 83 main
conda 1.6 MB | linux-ppc64le/r-rbiom-2.2.1-r44h8455397_0.conda  6 months and 10 days ago 30 main
conda 1.6 MB | linux-aarch64/r-rbiom-2.2.1-r44h21d2c02_0.conda  6 months and 10 days ago 94 main
conda 1.5 MB | linux-aarch64/r-rbiom-2.2.1-r43h21d2c02_0.conda  6 months and 10 days ago 80 main
conda 1.5 MB | linux-ppc64le/r-rbiom-2.2.1-r43h8455397_0.conda  6 months and 10 days ago 29 main
conda 1.5 MB | linux-64/r-rbiom-2.2.1-r43h93ab643_0.conda  6 months and 10 days ago 1164 main
conda 1.6 MB | linux-64/r-rbiom-2.2.1-r44h93ab643_0.conda  6 months and 10 days ago 1865 main

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