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Functions for reading, writing, plotting, analysing, and manipulating allelic and haplotypic data, including from VCF files, and for the analysis of population nucleotide sequences and micro-satellites including coalescent analyses, linkage disequilibrium, population structure (Fst, Amova) and equilibrium (HWE), haplotype networks, minimum spanning tree and network, and median-joining networks.

copied from cf-staging / r-pegas
Type Size Name Uploaded Downloads Labels
conda 841.0 kB | win-64/r-pegas-1.3-r44h11b023d_1.conda  2 months and 30 days ago 36 main
conda 834.2 kB | win-64/r-pegas-1.3-r43h11b023d_1.conda  2 months and 30 days ago 39 main
conda 832.8 kB | osx-64/r-pegas-1.3-r43h199b6f9_1.conda  2 months and 30 days ago 32 main
conda 841.9 kB | osx-64/r-pegas-1.3-r44h199b6f9_1.conda  2 months and 30 days ago 28 main
conda 833.6 kB | linux-64/r-pegas-1.3-r43h2b5f3a1_1.conda  2 months and 30 days ago 342 main
conda 841.2 kB | linux-64/r-pegas-1.3-r44h2b5f3a1_1.conda  2 months and 30 days ago 343 main
conda 835.0 kB | win-64/r-pegas-1.3-r41h6d2157b_0.conda  1 year and 24 days ago 282 main
conda 832.6 kB | osx-64/r-pegas-1.3-r43hb2c329c_0.conda  1 year and 24 days ago 241 main
conda 834.2 kB | osx-64/r-pegas-1.3-r42hb2c329c_0.conda  1 year and 24 days ago 254 main
conda 833.8 kB | linux-64/r-pegas-1.3-r43h57805ef_0.conda  1 year and 24 days ago 1243 main
conda 834.0 kB | linux-64/r-pegas-1.3-r42h57805ef_0.conda  1 year and 24 days ago 1246 main
conda 833.1 kB | win-64/r-pegas-1.2-r41h6d2157b_1.conda  1 year and 6 months ago 398 main
conda 830.1 kB | osx-64/r-pegas-1.2-r43h6dc245f_1.conda  1 year and 6 months ago 229 main
conda 832.5 kB | osx-64/r-pegas-1.2-r42h6dc245f_1.conda  1 year and 6 months ago 218 main
conda 831.7 kB | linux-64/r-pegas-1.2-r42h57805ef_1.conda  1 year and 6 months ago 1339 main
conda 830.4 kB | linux-64/r-pegas-1.2-r43h57805ef_1.conda  1 year and 6 months ago 1349 main
conda 831.9 kB | win-64/r-pegas-1.2-r41h6d2157b_0.conda  1 year and 10 months ago 522 main
conda 830.8 kB | osx-64/r-pegas-1.2-r41h815d134_0.conda  1 year and 10 months ago 228 main
conda 831.7 kB | osx-64/r-pegas-1.2-r42h815d134_0.conda  1 year and 10 months ago 233 main
conda 831.0 kB | linux-64/r-pegas-1.2-r41h133d619_0.conda  1 year and 10 months ago 1822 main
conda 831.6 kB | linux-64/r-pegas-1.2-r42h133d619_0.conda  1 year and 10 months ago 1611 main
conda 1.0 MB | win-64/r-pegas-1.1-r41h6d2157b_1.tar.bz2  2 years and 2 months ago 545 main
conda 1.0 MB | osx-64/r-pegas-1.1-r41h815d134_1.tar.bz2  2 years and 2 months ago 76 main
conda 1.0 MB | osx-64/r-pegas-1.1-r42h815d134_1.tar.bz2  2 years and 2 months ago 78 main
conda 1.0 MB | linux-64/r-pegas-1.1-r41h06615bd_1.tar.bz2  2 years and 2 months ago 1652 main
conda 1.0 MB | linux-64/r-pegas-1.1-r42h06615bd_1.tar.bz2  2 years and 2 months ago 1680 main
conda 1.0 MB | win-64/r-pegas-1.1-r40h6d2157b_0.tar.bz2  3 years and 21 days ago 704 main
conda 1.0 MB | win-64/r-pegas-1.1-r41h6d2157b_0.tar.bz2  3 years and 21 days ago 716 main
conda 1.0 MB | osx-64/r-pegas-1.1-r40h28b5c78_0.tar.bz2  3 years and 21 days ago 85 main
conda 1.0 MB | osx-64/r-pegas-1.1-r41h28b5c78_0.tar.bz2  3 years and 21 days ago 80 main
conda 1.0 MB | linux-64/r-pegas-1.1-r40hcfec24a_0.tar.bz2  3 years and 21 days ago 2056 main
conda 1.0 MB | linux-64/r-pegas-1.1-r41hcfec24a_0.tar.bz2  3 years and 21 days ago 2000 main
conda 1.0 MB | win-64/r-pegas-1.0_1-r41h6d2157b_0.tar.bz2  3 years and 7 months ago 787 main
conda 1.0 MB | osx-64/r-pegas-1.0_1-r41h28b5c78_0.tar.bz2  3 years and 7 months ago 172 main
conda 1.0 MB | linux-64/r-pegas-1.0_1-r41hcfec24a_0.tar.bz2  3 years and 7 months ago 2286 main
conda 1.0 MB | win-64/r-pegas-1.0_1-r36h6d2157b_0.tar.bz2  3 years and 7 months ago 782 main
conda 1.0 MB | win-64/r-pegas-1.0_1-r40h6d2157b_0.tar.bz2  3 years and 7 months ago 787 main
conda 1.0 MB | osx-64/r-pegas-1.0_1-r36h28b5c78_0.tar.bz2  3 years and 7 months ago 148 main
conda 1.0 MB | osx-64/r-pegas-1.0_1-r40h28b5c78_0.tar.bz2  3 years and 7 months ago 155 main
conda 1.0 MB | linux-64/r-pegas-1.0_1-r40hcfec24a_0.tar.bz2  3 years and 7 months ago 2289 main
conda 1.0 MB | linux-64/r-pegas-1.0_1-r36hcfec24a_0.tar.bz2  3 years and 7 months ago 2281 main
conda 1.0 MB | osx-64/r-pegas-1.0-r36h28b5c78_0.tar.bz2  3 years and 8 months ago 181 main
conda 1.0 MB | win-64/r-pegas-1.0-r36h6d2157b_0.tar.bz2  3 years and 8 months ago 833 main
conda 1.0 MB | win-64/r-pegas-1.0-r40h6d2157b_0.tar.bz2  3 years and 8 months ago 893 main
conda 1.0 MB | osx-64/r-pegas-1.0-r40h28b5c78_0.tar.bz2  3 years and 8 months ago 230 main
conda 1.0 MB | linux-64/r-pegas-1.0-r40hcfec24a_0.tar.bz2  3 years and 8 months ago 2414 main
conda 1.0 MB | linux-64/r-pegas-1.0-r36hcfec24a_0.tar.bz2  3 years and 8 months ago 2369 main
conda 787.9 kB | win-64/r-pegas-0.14-r40hda5aaf8_0.tar.bz2  4 years and 3 months ago 992 main
conda 790.8 kB | win-64/r-pegas-0.14-r36hda5aaf8_0.tar.bz2  4 years and 3 months ago 1003 main
conda 744.2 kB | osx-64/r-pegas-0.14-r40h800e0f2_0.tar.bz2  4 years and 3 months ago 315 main

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