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Apply Partial Correlation coefficient with Information Theory (PCIT) to a correlation matrix. The PCIT algorithm identifies meaningful correlations to define edges in a weighted network. The algorithm can be applied to any correlation-based network including but not limited to gene co-expression networks. To reduce compute time by making use of multiple compute cores, simply run PCIT on a computer with has multiple cores and also has the Rmpi package installed. PCIT will then auto-detect the multicore environment and run in parallel mode without the need to rewrite your scripts. This makes scripts, using PCIT, portable across single core (or no Rmpi package installed) computers which will run in serial mode and multicore (with Rmpi package installed) computers which will run in parallel mode.

copied from cf-staging / r-pcit
Type Size Name Uploaded Downloads Labels
conda 1.4 MB | win-64/r-pcit-1.5_3-r43h28841b1_1008.conda  8 months and 4 days ago 268 main
conda 1.4 MB | win-64/r-pcit-1.5_3-r44h28841b1_1008.conda  8 months and 4 days ago 277 main
conda 1.4 MB | osx-64/r-pcit-1.5_3-r43ha55dbfc_1008.conda  8 months and 4 days ago 229 main
conda 1.4 MB | osx-64/r-pcit-1.5_3-r44ha55dbfc_1008.conda  8 months and 4 days ago 219 main
conda 1.4 MB | linux-64/r-pcit-1.5_3-r43hc8b2c43_1008.conda  8 months and 4 days ago 912 main
conda 1.4 MB | linux-64/r-pcit-1.5_3-r44hc8b2c43_1008.conda  8 months and 4 days ago 908 main
conda 1.4 MB | win-64/r-pcit-1.5_3-r41hd5c7e75_1007.conda  1 year and 8 months ago 489 main
conda 1.4 MB | osx-64/r-pcit-1.5_3-r42h9c7a460_1007.conda  1 year and 8 months ago 239 main
conda 1.4 MB | osx-64/r-pcit-1.5_3-r43h9c7a460_1007.conda  1 year and 8 months ago 239 main
conda 1.4 MB | linux-64/r-pcit-1.5_3-r42hd8f1df9_1007.conda  1 year and 8 months ago 1462 main
conda 1.4 MB | linux-64/r-pcit-1.5_3-r43hd8f1df9_1007.conda  1 year and 8 months ago 1477 main
conda 1.5 MB | win-64/r-pcit-1.5_3-r41hd5c7e75_1006.tar.bz2  2 years and 5 months ago 533 main
conda 1.5 MB | osx-64/r-pcit-1.5_3-r41hcf7530e_1006.tar.bz2  2 years and 5 months ago 72 main
conda 1.5 MB | osx-64/r-pcit-1.5_3-r42hcf7530e_1006.tar.bz2  2 years and 5 months ago 72 main
conda 1.5 MB | linux-64/r-pcit-1.5_3-r42hc3ea6d6_1006.tar.bz2  2 years and 5 months ago 1810 main
conda 1.5 MB | linux-64/r-pcit-1.5_3-r41hc3ea6d6_1006.tar.bz2  2 years and 5 months ago 1802 main
conda 1.5 MB | win-64/r-pcit-1.5_3-r41hd5c7e75_1005.tar.bz2  3 years and 9 months ago 807 main
conda 1.5 MB | win-64/r-pcit-1.5_3-r40hd5c7e75_1005.tar.bz2  3 years and 9 months ago 779 main
conda 1.5 MB | osx-64/r-pcit-1.5_3-r40h0661a58_1005.tar.bz2  3 years and 9 months ago 150 main
conda 1.5 MB | osx-64/r-pcit-1.5_3-r41h0661a58_1005.tar.bz2  3 years and 9 months ago 146 main
conda 1.5 MB | linux-64/r-pcit-1.5_3-r41h92ddd45_1005.tar.bz2  3 years and 9 months ago 2394 main
conda 1.5 MB | linux-64/r-pcit-1.5_3-r40h92ddd45_1005.tar.bz2  3 years and 9 months ago 2412 main
conda 1.5 MB | win-64/r-pcit-1.5_3-r36h8933c1f_1005.tar.bz2  4 years and 4 months ago 993 main
conda 1.5 MB | win-64/r-pcit-1.5_3-r40h8933c1f_1005.tar.bz2  4 years and 4 months ago 947 main
conda 1.5 MB | osx-64/r-pcit-1.5_3-r36h508aa58_1005.tar.bz2  4 years and 4 months ago 286 main
conda 1.5 MB | osx-64/r-pcit-1.5_3-r36h43114d0_1005.tar.bz2  4 years and 4 months ago 283 main
conda 1.5 MB | osx-64/r-pcit-1.5_3-r40h43114d0_1005.tar.bz2  4 years and 4 months ago 281 main
conda 1.5 MB | osx-64/r-pcit-1.5_3-r40h508aa58_1005.tar.bz2  4 years and 4 months ago 286 main
conda 1.5 MB | linux-64/r-pcit-1.5_3-r36h6e990d7_1005.tar.bz2  4 years and 4 months ago 2747 main
conda 1.5 MB | linux-64/r-pcit-1.5_3-r40h6e990d7_1005.tar.bz2  4 years and 4 months ago 2706 main
conda 1.5 MB | linux-64/r-pcit-1.5_3-r40h86c2bf4_1005.tar.bz2  4 years and 4 months ago 2703 main
conda 1.5 MB | linux-64/r-pcit-1.5_3-r36h86c2bf4_1005.tar.bz2  4 years and 4 months ago 2741 main
conda 1.5 MB | win-64/r-pcit-1.5_3-r40h8933c1f_1004.tar.bz2  4 years and 10 months ago 1015 main
conda 1.5 MB | win-64/r-pcit-1.5_3-r36h8933c1f_1004.tar.bz2  4 years and 10 months ago 1045 main
conda 1.4 MB | osx-64/r-pcit-1.5_3-r36h1ddc27c_1004.tar.bz2  4 years and 10 months ago 346 main
conda 1.4 MB | osx-64/r-pcit-1.5_3-r40h1ddc27c_1004.tar.bz2  4 years and 10 months ago 327 main
conda 1.5 MB | linux-64/r-pcit-1.5_3-r36h6e990d7_1004.tar.bz2  4 years and 10 months ago 3073 main
conda 1.5 MB | linux-64/r-pcit-1.5_3-r40h6e990d7_1004.tar.bz2  4 years and 10 months ago 3100 main
conda 1.5 MB | win-64/r-pcit-1.5_3-r36h8933c1f_1003.tar.bz2  5 years and 6 months ago 1389 main cf202003
conda 1.5 MB | win-64/r-pcit-1.5_3-r35h8933c1f_1003.tar.bz2  5 years and 6 months ago 1385 main cf202003
conda 1.5 MB | osx-64/r-pcit-1.5_3-r35hd44dcd8_1003.tar.bz2  5 years and 6 months ago 354 main cf202003
conda 1.5 MB | osx-64/r-pcit-1.5_3-r36hd44dcd8_1003.tar.bz2  5 years and 6 months ago 360 main cf202003
conda 1.4 MB | osx-64/r-pcit-1.5_3-r35h4bb4525_1003.tar.bz2  5 years and 6 months ago 356 main cf202003
conda 1.5 MB | osx-64/r-pcit-1.5_3-r36h4bb4525_1003.tar.bz2  5 years and 6 months ago 355 main cf202003
conda 1.5 MB | linux-64/r-pcit-1.5_3-r35h6e990d7_1003.tar.bz2  5 years and 6 months ago 3867 main cf202003
conda 1.5 MB | linux-64/r-pcit-1.5_3-r36h6e990d7_1003.tar.bz2  5 years and 6 months ago 3874 main cf202003
conda 1.5 MB | win-64/r-pcit-1.5_3-r36h8933c1f_1002.tar.bz2  5 years and 7 months ago 1382 main cf202003
conda 1.5 MB | win-64/r-pcit-1.5_3-r35h8933c1f_1002.tar.bz2  5 years and 7 months ago 1381 main cf202003
conda 1.5 MB | osx-64/r-pcit-1.5_3-r35hd44dcd8_1002.tar.bz2  5 years and 7 months ago 360 main cf202003
conda 1.5 MB | osx-64/r-pcit-1.5_3-r36hd44dcd8_1002.tar.bz2  5 years and 7 months ago 365 main cf202003

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