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Apply Partial Correlation coefficient with Information Theory (PCIT) to a correlation matrix. The PCIT algorithm identifies meaningful correlations to define edges in a weighted network. The algorithm can be applied to any correlation-based network including but not limited to gene co-expression networks. To reduce compute time by making use of multiple compute cores, simply run PCIT on a computer with has multiple cores and also has the Rmpi package installed. PCIT will then auto-detect the multicore environment and run in parallel mode without the need to rewrite your scripts. This makes scripts, using PCIT, portable across single core (or no Rmpi package installed) computers which will run in serial mode and multicore (with Rmpi package installed) computers which will run in parallel mode.

copied from cf-staging / r-pcit
Type Size Name Uploaded Downloads Labels
conda 1.5 MB | linux-64/r-pcit-1.5_3-r35h6e990d7_1002.tar.bz2  5 years and 7 months ago 3812 main cf202003
conda 1.5 MB | linux-64/r-pcit-1.5_3-r36h6e990d7_1002.tar.bz2  5 years and 7 months ago 3843 main cf202003
conda 1.4 MB | linux-64/r-pcit-1.5_3-r351ha44fe06_1.tar.bz2  6 years and 4 months ago 4655 main cf202003 cf201901
conda 1.5 MB | linux-64/r-pcit-1.5_3-r351h9ac9557_1001.tar.bz2  6 years and 4 months ago 4457 main gcc7 cf202003
conda 1.5 MB | win-64/r-pcit-1.5_3-r351h8933c1f_1001.tar.bz2  6 years and 4 months ago 1683 main cf202003 cf201901
conda 1.5 MB | osx-64/r-pcit-1.5_3-r351ha44fe06_1.tar.bz2  6 years and 4 months ago 371 main cf202003 cf201901
conda 1.4 MB | osx-64/r-pcit-1.5_3-r351hdc02c5d_1001.tar.bz2  6 years and 4 months ago 373 main gcc7 cf202003
conda 1.4 MB | win-64/r-pcit-1.5_3-r341h8933c1f_1.tar.bz2  6 years and 7 months ago 1786 main cf202003 cf201901
conda 1.4 MB | osx-64/r-pcit-1.5_3-r341ha44fe06_1.tar.bz2  6 years and 7 months ago 360 main cf202003 cf201901
conda 1.4 MB | linux-64/r-pcit-1.5_3-r341ha44fe06_1.tar.bz2  6 years and 7 months ago 4704 main cf202003 cf201901
conda 1.4 MB | win-64/r-pcit-1.5_3-r3.4.1_0.tar.bz2  7 years and 1 month ago 1876 main cf202003 cf201901
conda 1.4 MB | win-64/r-pcit-1.5_3-r3.3.2_0.tar.bz2  7 years and 1 month ago 1879 main cf202003 cf201901
conda 1.4 MB | osx-64/r-pcit-1.5_3-r3.4.1_0.tar.bz2  7 years and 1 month ago 377 main cf202003 cf201901
conda 1.4 MB | osx-64/r-pcit-1.5_3-r3.3.2_0.tar.bz2  7 years and 1 month ago 365 main cf202003 cf201901
conda 1.4 MB | linux-64/r-pcit-1.5_3-r3.4.1_0.tar.bz2  7 years and 1 month ago 5043 main cf202003 cf201901
conda 1.4 MB | linux-64/r-pcit-1.5_3-r3.3.2_0.tar.bz2  7 years and 1 month ago 5076 main cf202003 cf201901

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