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Matrix eQTL is designed for fast eQTL analysis on large datasets. Matrix eQTL can test for association between genotype and gene expression using linear regression with either additive or ANOVA genotype effects. The models can include covariates to account for factors as population stratification, gender, and clinical variables. It also supports models with heteroscedastic and/or correlated errors, false discovery rate estimation and separate treatment of local (cis) and distant (trans) eQTLs. For more details see Shabalin (2012) <doi:10.1093/bioinformatics/bts163>.

copied from cf-staging / r-matrixeqtl
Type Size Name Uploaded Downloads Labels
conda 285.5 kB | noarch/r-matrixeqtl-2.2-r36h6115d3f_1002.tar.bz2  6 years and 29 days ago 4141 main cf202003
conda 323.0 kB | noarch/r-matrixeqtl-2.2-r35h6115d3f_1002.tar.bz2  6 years and 29 days ago 4094 main cf202003
conda 322.7 kB | noarch/r-matrixeqtl-2.2-r351h6115d3f_1001.tar.bz2  6 years and 8 months ago 4735 main cf202003 gcc7 cf201901
conda 321.1 kB | win-64/r-matrixeqtl-2.2-r351h6115d3f_1.tar.bz2  6 years and 9 months ago 1705 main cf202003 cf201901
conda 235.5 kB | win-64/r-matrixeqtl-2.2-r341h6115d3f_1.tar.bz2  6 years and 9 months ago 1687 main cf202003 cf201901
conda 322.1 kB | osx-64/r-matrixeqtl-2.2-r351h6115d3f_1.tar.bz2  6 years and 10 months ago 370 main cf202003 cf201901
conda 239.4 kB | osx-64/r-matrixeqtl-2.2-r341h6115d3f_1.tar.bz2  6 years and 10 months ago 368 main cf202003 cf201901
conda 239.6 kB | linux-64/r-matrixeqtl-2.2-r341h6115d3f_1.tar.bz2  6 years and 10 months ago 5057 main cf202003 cf201901
conda 322.4 kB | linux-64/r-matrixeqtl-2.2-r351h6115d3f_1.tar.bz2  6 years and 10 months ago 4989 main cf202003 cf201901
conda 237.7 kB | win-64/r-matrixeqtl-2.2-r3.4.1_0.tar.bz2  7 years and 6 months ago 2292 main cf202003 cf201901
conda 228.5 kB | win-64/r-matrixeqtl-2.2-r3.3.2_0.tar.bz2  7 years and 6 months ago 2314 main cf202003 cf201901
conda 239.9 kB | osx-64/r-matrixeqtl-2.2-r3.4.1_0.tar.bz2  7 years and 6 months ago 820 main cf202003 cf201901
conda 216.6 kB | osx-64/r-matrixeqtl-2.2-r3.3.2_0.tar.bz2  7 years and 6 months ago 829 main cf202003 cf201901
conda 239.7 kB | linux-64/r-matrixeqtl-2.2-r3.4.1_0.tar.bz2  7 years and 6 months ago 5690 main cf202003 cf201901
conda 216.5 kB | linux-64/r-matrixeqtl-2.2-r3.3.2_0.tar.bz2  7 years and 6 months ago 6068 main cf202003 cf201901

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