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Matrix eQTL is designed for fast eQTL analysis on large datasets. Matrix eQTL can test for association between genotype and gene expression using linear regression with either additive or ANOVA genotype effects. The models can include covariates to account for factors as population stratification, gender, and clinical variables. It also supports models with heteroscedastic and/or correlated errors, false discovery rate estimation and separate treatment of local (cis) and distant (trans) eQTLs. For more details see Shabalin (2012) <doi:10.1093/bioinformatics/bts163>.

copied from cf-staging / r-matrixeqtl
Type Size Name Uploaded Downloads Labels
conda 327.1 kB | noarch/r-matrixeqtl-2.3-r35h6115d3f_0.tar.bz2  5 years and 8 months ago 3669 main cf202003
conda 289.2 kB | noarch/r-matrixeqtl-2.3-r36h6115d3f_0.tar.bz2  5 years and 8 months ago 3686 main cf202003
conda 285.5 kB | noarch/r-matrixeqtl-2.2-r36h6115d3f_1002.tar.bz2  6 years and 1 month ago 4152 main cf202003
conda 323.0 kB | noarch/r-matrixeqtl-2.2-r35h6115d3f_1002.tar.bz2  6 years and 1 month ago 4103 main cf202003
conda 322.7 kB | noarch/r-matrixeqtl-2.2-r351h6115d3f_1001.tar.bz2  6 years and 9 months ago 4744 main cf202003 gcc7 cf201901
conda 321.1 kB | win-64/r-matrixeqtl-2.2-r351h6115d3f_1.tar.bz2  6 years and 10 months ago 1706 main cf202003 cf201901
conda 235.5 kB | win-64/r-matrixeqtl-2.2-r341h6115d3f_1.tar.bz2  6 years and 10 months ago 1688 main cf202003 cf201901
conda 322.1 kB | osx-64/r-matrixeqtl-2.2-r351h6115d3f_1.tar.bz2  6 years and 10 months ago 370 main cf202003 cf201901
conda 239.4 kB | osx-64/r-matrixeqtl-2.2-r341h6115d3f_1.tar.bz2  6 years and 10 months ago 368 main cf202003 cf201901
conda 239.6 kB | linux-64/r-matrixeqtl-2.2-r341h6115d3f_1.tar.bz2  6 years and 10 months ago 5071 main cf202003 cf201901
conda 322.4 kB | linux-64/r-matrixeqtl-2.2-r351h6115d3f_1.tar.bz2  6 years and 10 months ago 5003 main cf202003 cf201901
conda 237.7 kB | win-64/r-matrixeqtl-2.2-r3.4.1_0.tar.bz2  7 years and 6 months ago 2380 main cf202003 cf201901
conda 228.5 kB | win-64/r-matrixeqtl-2.2-r3.3.2_0.tar.bz2  7 years and 6 months ago 2431 main cf202003 cf201901
conda 239.9 kB | osx-64/r-matrixeqtl-2.2-r3.4.1_0.tar.bz2  7 years and 6 months ago 907 main cf202003 cf201901
conda 216.6 kB | osx-64/r-matrixeqtl-2.2-r3.3.2_0.tar.bz2  7 years and 6 months ago 915 main cf202003 cf201901
conda 239.7 kB | linux-64/r-matrixeqtl-2.2-r3.4.1_0.tar.bz2  7 years and 6 months ago 5805 main cf202003 cf201901
conda 216.5 kB | linux-64/r-matrixeqtl-2.2-r3.3.2_0.tar.bz2  7 years and 6 months ago 6199 main cf202003 cf201901

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