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Provides R users with direct access to genomic and clinical data from the 'cBioPortal' web resource via user-friendly functions that wrap 'cBioPortal's' existing API endpoints <https://www.cbioportal.org/api/swagger-ui/index.html>. Users can browse and query genomic data on mutations, copy number alterations and fusions, as well as data on tumor mutational burden ('TMB'), microsatellite instability status ('MSI'), 'FACETS' and select clinical data points (depending on the study). See <https://www.cbioportal.org/> and Gao et al., (2013) <doi:10.1126/scisignal.2004088> for more information on the cBioPortal web resource.

copied from cf-post-staging / r-cbioportalr
Type Size Name Uploaded Downloads Labels
conda 1.7 MB | noarch/r-cbioportalr-1.0.1-r42hc72bb7e_2.conda  2 years and 3 months ago 1406 main
conda 1.7 MB | noarch/r-cbioportalr-1.0.1-r43hc72bb7e_2.conda  2 years and 3 months ago 1449 main
conda 1.7 MB | noarch/r-cbioportalr-1.0.1-r42hc72bb7e_1.tar.bz2  2 years and 11 months ago 1775 main
conda 1.7 MB | noarch/r-cbioportalr-1.0.1-r41hc72bb7e_1.tar.bz2  2 years and 11 months ago 1745 main
conda 1.7 MB | noarch/r-cbioportalr-1.0.1-r41hc72bb7e_0.tar.bz2  3 years and 30 days ago 1964 main
conda 1.7 MB | noarch/r-cbioportalr-1.0.1-r40hc72bb7e_0.tar.bz2  3 years and 30 days ago 1967 main

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