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Toolset for the exploration of genetic and genomic data. Adegenet provides formal (S4) classes for storing and handling various genetic data, including genetic markers with varying ploidy and hierarchical population structure ('genind' class), alleles counts by populations ('genpop'), and genome-wide SNP data ('genlight'). It also implements original multivariate methods (DAPC, sPCA), graphics, statistical tests, simulation tools, distance and similarity measures, and several spatial methods. A range of both empirical and simulated datasets is also provided to illustrate various methods.

copied from cf-staging / r-adegenet
Type Size Name Uploaded Downloads Labels
conda 2.9 MB | osx-64/r-adegenet-2.1.4-r41h28b5c78_0.tar.bz2  3 years and 4 months ago 126 main
conda 2.9 MB | linux-64/r-adegenet-2.1.4-r40hcfec24a_0.tar.bz2  3 years and 4 months ago 2164 main
conda 2.9 MB | linux-64/r-adegenet-2.1.4-r41hcfec24a_0.tar.bz2  3 years and 4 months ago 2277 main
conda 2.8 MB | win-64/r-adegenet-2.1.3-r41h6d2157b_1.tar.bz2  3 years and 6 months ago 798 main
conda 2.9 MB | win-64/r-adegenet-2.1.3-r40h6d2157b_1.tar.bz2  3 years and 6 months ago 790 main
conda 2.9 MB | osx-64/r-adegenet-2.1.3-r40h28b5c78_1.tar.bz2  3 years and 6 months ago 160 main
conda 2.9 MB | osx-64/r-adegenet-2.1.3-r41h28b5c78_1.tar.bz2  3 years and 6 months ago 145 main
conda 2.9 MB | linux-64/r-adegenet-2.1.3-r40hcfec24a_1.tar.bz2  3 years and 6 months ago 2199 main
conda 2.9 MB | linux-64/r-adegenet-2.1.3-r41hcfec24a_1.tar.bz2  3 years and 6 months ago 2227 main
conda 2.9 MB | win-64/r-adegenet-2.1.3-r40hda5aaf8_1.tar.bz2  4 years and 6 months ago 1052 main
conda 3.0 MB | win-64/r-adegenet-2.1.3-r36hda5aaf8_1.tar.bz2  4 years and 6 months ago 1036 main
conda 2.9 MB | osx-64/r-adegenet-2.1.3-r36h17f1fa6_1.tar.bz2  4 years and 6 months ago 381 main
conda 2.9 MB | osx-64/r-adegenet-2.1.3-r40h17f1fa6_1.tar.bz2  4 years and 6 months ago 375 main
conda 2.9 MB | linux-64/r-adegenet-2.1.3-r36hcdcec82_1.tar.bz2  4 years and 6 months ago 3061 main
conda 2.9 MB | linux-64/r-adegenet-2.1.3-r40hcdcec82_1.tar.bz2  4 years and 6 months ago 3050 main
conda 2.9 MB | osx-64/r-adegenet-2.1.3-r36h17f1fa6_0.tar.bz2  4 years and 7 months ago 328 main
conda 2.9 MB | osx-64/r-adegenet-2.1.3-r40h17f1fa6_0.tar.bz2  4 years and 7 months ago 331 main
conda 2.9 MB | linux-64/r-adegenet-2.1.3-r36hcdcec82_0.tar.bz2  4 years and 7 months ago 2916 main
conda 2.9 MB | linux-64/r-adegenet-2.1.3-r40hcdcec82_0.tar.bz2  4 years and 7 months ago 2888 main
conda 2.9 MB | osx-64/r-adegenet-2.1.2-r36h17f1fa6_1.tar.bz2  4 years and 7 months ago 335 main
conda 2.9 MB | osx-64/r-adegenet-2.1.2-r40h17f1fa6_1.tar.bz2  4 years and 7 months ago 334 main
conda 2.8 MB | linux-64/r-adegenet-2.1.2-r40hcdcec82_1.tar.bz2  4 years and 7 months ago 2917 main
conda 2.9 MB | linux-64/r-adegenet-2.1.2-r36hcdcec82_1.tar.bz2  4 years and 7 months ago 2923 main
conda 2.8 MB | osx-64/r-adegenet-2.1.2-r35h17f1fa6_0.tar.bz2  4 years and 10 months ago 356 main cf202003
conda 2.8 MB | osx-64/r-adegenet-2.1.2-r36h17f1fa6_0.tar.bz2  4 years and 10 months ago 344 main cf202003
conda 2.8 MB | linux-64/r-adegenet-2.1.2-r35hcdcec82_0.tar.bz2  4 years and 10 months ago 3170 main cf202003
conda 2.8 MB | linux-64/r-adegenet-2.1.2-r36hcdcec82_0.tar.bz2  4 years and 10 months ago 3128 main cf202003
conda 2.8 MB | osx-64/r-adegenet-2.1.1-r35h159158b_0.tar.bz2  5 years and 3 months ago 351 main cf202003
conda 2.8 MB | osx-64/r-adegenet-2.1.1-r36h159158b_0.tar.bz2  5 years and 3 months ago 383 main cf202003
conda 2.8 MB | linux-64/r-adegenet-2.1.1-r35hcdcec82_0.tar.bz2  5 years and 3 months ago 3615 main cf202003
conda 2.8 MB | linux-64/r-adegenet-2.1.1-r36hcdcec82_0.tar.bz2  5 years and 3 months ago 3698 main cf202003

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