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perl-gdtextutil
|
public |
Text utilities for use with GD
|
2025-03-25 |
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edge-pro
|
public |
EDGE-pro (Estimated Degree of Gene Expression in PROkaryotes) is an efficient software system to estimate gene expression levels in prokaryotic genomes from RNA-seq data. EDGE-pro uses Bowtie2 for alignment and then estimates expression directly from the alignment results. EDGE-pro includes routines to assign reads aligning to overlapping gene regions accurately. 15% or more of bacterial genes overlap other genes, making this a significant problem for bacterial RNA-seq, one that is generally ignored by programs designed for eukaryotic RNA-seq experiments.
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2025-03-25 |
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perl-switch
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public |
A switch statement for Perl, do not use if you can use given/when
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2025-03-25 |
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perl-text-balanced
|
public |
Text::Balanced - Extract delimited text sequences from strings
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2025-03-25 |
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perl-if
|
public |
use a Perl module if a condition holds
|
2025-03-25 |
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perl-vcftools-vcf
|
public |
cpanm ready distribution of VCFtools Perl libraries
|
2025-03-25 |
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perl-time-hires
|
public |
High resolution alarm, sleep, gettimeofday, interval timers
|
2025-03-25 |
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perl-pod-escapes
|
public |
for resolving Pod Elt...gt sequences
|
2025-03-25 |
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perl-list-moreutils-xs
|
public |
Provide the stuff missing in List::Util in XS
|
2025-03-25 |
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perl-array-utils
|
public |
small utils for array manipulation
|
2025-03-25 |
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samtools
|
public |
Tools for dealing with SAM, BAM and CRAM files
|
2025-03-25 |
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perl-yaml
|
public |
YAML Ain't Markup Language
|
2025-03-25 |
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perl-xsloader
|
public |
Dynamically load C libraries into Perl code
|
2025-03-25 |
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perl-xml-xpathengine
|
public |
a re-usable XPath engine for DOM-like trees
|
2025-03-25 |
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perl-xml-xpath
|
public |
Parse and evaluate XPath statements.
|
2025-03-25 |
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perl-xml-writer
|
public |
Easily generate well-formed, namespace-aware XML.
|
2025-03-25 |
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perl-xml-twig
|
public |
XML, The Perl Way
|
2025-03-25 |
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perl-xml-simple
|
public |
An API for simple XML files
|
2025-03-25 |
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perl-xml-semanticdiff
|
public |
Perl extension for comparing XML documents.
|
2025-03-25 |
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perl-xml-sax-writer
|
public |
SAX2 XML Writer
|
2025-03-25 |
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perl-xml-sax-expat
|
public |
SAX Driver for Expat
|
2025-03-25 |
|
perl-xml-sax-base
|
public |
Base class for SAX Drivers and Filters
|
2025-03-25 |
|
perl-xml-sax
|
public |
Simple API for XML
|
2025-03-25 |
|
perl-xml-regexp
|
public |
Regular expressions for XML tokens
|
2025-03-25 |
|
perl-xml-parser-lite
|
public |
Lightweight pure-perl XML Parser (based on regexps)
|
2025-03-25 |
