| Package Name | Access | Summary | Updated |
|---|---|---|---|
| biobambam | public | No Summary | 2025-03-25 |
| mafft | public | Multiple alignment program for amino acid or nucleotide sequences based on fast Fourier transform | 2025-03-25 |
| star | public | An RNA-seq read aligner. | 2025-03-25 |
| julia | public | No Summary | 2025-03-25 |
| gatk | public | No Summary | 2025-03-25 |
| picard | public | No Summary | 2025-03-25 |
| sra-tools | public | No Summary | 2025-03-25 |
| gsnap | public | No Summary | 2025-03-25 |
| java-jdk | public | No Summary | 2025-03-25 |
| fastqc | public | No Summary | 2025-03-25 |
| hmmer | public | No Summary | 2025-03-25 |
| bowtie2 | public | No Summary | 2025-03-25 |
| bedtools | public | A powerful toolset for genome arithmetic | 2025-03-25 |
| pll | public | Phylogenetic Likelihood Library | 2025-03-25 |
| perl | public | The Perl programming language interpreter. | 2025-03-25 |
| xopen | public | Open compressed files transparently in Python | 2025-03-25 |
| bamtools | public | C++ API & command-line toolkit for working with BAM data | 2025-03-25 |
| cufflinks | public | Transcriptome assembly and differential expression analysis for RNA-Seq. | 2025-03-25 |
| blat | public | BLAT is a bioinformatics software tool which performs rapid mRNA/DNA and cross-species protein alignments. | 2025-03-25 |
| bwa | public | No Summary | 2025-03-25 |
| blast | public | BLAST+ is a new suite of BLAST tools that utilizes the NCBI C++ Toolkit | 2025-03-25 |
