Package repository for compbiocore

Packages
biobambam main linux-64/biobambam-2.0.72-1.tar.bz2 main linux-64/biobambam-2.0.72-0.tar.bz2 main
mafft deprecated linux-64/mafft-7.305-0.tar.bz2 deprecated osx-64/mafft-7.305-0.tar.bz2 deprecated linux-64/mafft-7.313-h14c3975_0.tar.bz2 deprecated
star deprecated main linux-64/star-2.5.3a-0.tar.bz2 deprecated linux-64/star-2.6.1a-1.tar.bz2 main
julia deprecated linux-64/julia-0.5.1-1.tar.bz2 deprecated linux-64/julia-0.6.0-1.tar.bz2 deprecated
gatk deprecated main linux-64/gatk-3.5-5.tar.bz2 main linux-64/gatk-3.7-5.tar.bz2 deprecated linux-64/gatk-3.8-1.tar.bz2 main
picard deprecated main linux-64/picard-2.11.1-py27_0.tar.bz2 deprecated linux-64/picard-2.9.0-py27_0.tar.bz2 deprecated linux-64/picard-2.13.2-1.tar.bz2 main
sra-tools gcc-4.8.5 main linux-64/sra-tools-2.8.0-1.tar.bz2 main linux-64/sra-tools-2.8.0-0.tar.bz2 gcc-4.8.5
gsnap deprecated main linux-64/gsnap-2017.01.14-pl526_1.tar.bz2 main linux-64/gsnap-2017.01.14-pl5.20.3.1_0.tar.bz2 deprecated
java-jdk deprecated linux-64/java-jdk-7.0.95-1.tar.bz2 deprecated linux-64/java-jdk-8.45.14-0.tar.bz2 deprecated
fastqc deprecated main linux-64/fastqc-0.11.5-0.tar.bz2 main linux-64/fastqc-0.11.5-1.tar.bz2 deprecated
hmmer deprecated main linux-64/hmmer-3.1b2-1.tar.bz2 main linux-64/hmmer-3.1b2-0.tar.bz2 deprecated osx-64/hmmer-3.1b2-0.tar.bz2 deprecated
bowtie2 deprecated main linux-64/bowtie2-2.2.5-0.tar.bz2 deprecated linux-64/bowtie2-2.3.0-py27pl5.22.2.1_0.tar.bz2 deprecated linux-64/bowtie2-2.3.0-py27_1.tar.bz2 main linux-64/bowtie2-2.3.0-py27_2.tar.bz2 main
bedtools deprecated main linux-64/bedtools-2.26.0gx-0.tar.bz2 deprecated linux-64/bedtools-2.28.0-hf484d3e_1.tar.bz2 main
pll deprecated linux-64/pll-1.0.11-0.tar.bz2 deprecated
perl deprecated linux-64/perl-5.22.2.1-0.tar.bz2 deprecated linux-64/perl-5.20.3.1-0.tar.bz2 deprecated
xopen deprecated linux-64/xopen-0.1.1-py27_0.tar.bz2 deprecated
bamtools deprecated linux-64/bamtools-2.4.0-3.tar.bz2 deprecated
cufflinks deprecated linux-64/cufflinks-2.2.1-py27_1.tar.bz2 deprecated
blat deprecated linux-64/blat-35-1.tar.bz2 deprecated
bwa deprecated gcc-4.8.5 main osx-64/bwa-0.7.5a-0.tar.bz2 deprecated linux-64/bwa-0.7.17-0.tar.bz2 gcc-4.8.5 linux-64/bwa-0.7.17-1.tar.bz2 main linux-64/bwa-0.7.8-0.tar.bz2 deprecated
blast deprecated linux-64/blast-2.5.0-0.tar.bz2 deprecated

biobambam main
- linux-64/biobambam-2.0.72-1.tar.bz2 main
- linux-64/biobambam-2.0.72-0.tar.bz2 main

mafft deprecated
- linux-64/mafft-7.305-0.tar.bz2 deprecated
- osx-64/mafft-7.305-0.tar.bz2 deprecated
- linux-64/mafft-7.313-h14c3975_0.tar.bz2 deprecated

star deprecated main
- linux-64/star-2.5.3a-0.tar.bz2 deprecated
- linux-64/star-2.6.1a-1.tar.bz2 main

julia deprecated
- linux-64/julia-0.5.1-1.tar.bz2 deprecated
- linux-64/julia-0.6.0-1.tar.bz2 deprecated

gatk deprecated main
- linux-64/gatk-3.5-5.tar.bz2 main
- linux-64/gatk-3.7-5.tar.bz2 deprecated
- linux-64/gatk-3.8-1.tar.bz2 main

picard deprecated main
- linux-64/picard-2.11.1-py27_0.tar.bz2 deprecated
- linux-64/picard-2.9.0-py27_0.tar.bz2 deprecated
- linux-64/picard-2.13.2-1.tar.bz2 main

sra-tools gcc-4.8.5 main
- linux-64/sra-tools-2.8.0-1.tar.bz2 main
- linux-64/sra-tools-2.8.0-0.tar.bz2 gcc-4.8.5

gsnap deprecated main
- linux-64/gsnap-2017.01.14-pl526_1.tar.bz2 main
- linux-64/gsnap-2017.01.14-pl5.20.3.1_0.tar.bz2 deprecated

java-jdk deprecated
- linux-64/java-jdk-7.0.95-1.tar.bz2 deprecated
- linux-64/java-jdk-8.45.14-0.tar.bz2 deprecated

fastqc deprecated main
- linux-64/fastqc-0.11.5-0.tar.bz2 main
- linux-64/fastqc-0.11.5-1.tar.bz2 deprecated

hmmer deprecated main
- linux-64/hmmer-3.1b2-1.tar.bz2 main
- linux-64/hmmer-3.1b2-0.tar.bz2 deprecated
- osx-64/hmmer-3.1b2-0.tar.bz2 deprecated

bowtie2 deprecated main
- linux-64/bowtie2-2.2.5-0.tar.bz2 deprecated
- linux-64/bowtie2-2.3.0-py27pl5.22.2.1_0.tar.bz2 deprecated
- linux-64/bowtie2-2.3.0-py27_1.tar.bz2 main
- linux-64/bowtie2-2.3.0-py27_2.tar.bz2 main

bedtools deprecated main
- linux-64/bedtools-2.26.0gx-0.tar.bz2 deprecated
- linux-64/bedtools-2.28.0-hf484d3e_1.tar.bz2 main

pll deprecated
- linux-64/pll-1.0.11-0.tar.bz2 deprecated

perl deprecated
- linux-64/perl-5.22.2.1-0.tar.bz2 deprecated
- linux-64/perl-5.20.3.1-0.tar.bz2 deprecated

xopen deprecated
- linux-64/xopen-0.1.1-py27_0.tar.bz2 deprecated

bamtools deprecated
- linux-64/bamtools-2.4.0-3.tar.bz2 deprecated

cufflinks deprecated
- linux-64/cufflinks-2.2.1-py27_1.tar.bz2 deprecated

blat deprecated
- linux-64/blat-35-1.tar.bz2 deprecated

bwa deprecated gcc-4.8.5 main
- osx-64/bwa-0.7.5a-0.tar.bz2 deprecated
- linux-64/bwa-0.7.17-0.tar.bz2 gcc-4.8.5
- linux-64/bwa-0.7.17-1.tar.bz2 main
- linux-64/bwa-0.7.8-0.tar.bz2 deprecated

blast deprecated
- linux-64/blast-2.5.0-0.tar.bz2 deprecated

compbiocore / files

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