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transdecoder

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TransDecoder identifies candidate coding regions within transcript sequences, such as those generated by de novo RNA-Seq transcript assembly using Trinity, or constructed based on RNA-Seq alignments to the genome using Tophat and Cufflinks.

Installation

To install this package, run one of the following:

Conda
$conda install soil::transdecoder

Usage Tracking

3.0.1
1 / 8 versions selected
Downloads (Last 6 months): 0

About

Summary

TransDecoder identifies candidate coding regions within transcript sequences, such as those generated by de novo RNA-Seq transcript assembly using Trinity, or constructed based on RNA-Seq alignments to the genome using Tophat and Cufflinks.

Last Updated

Dec 1, 2017 at 11:36

License

Broad Institute

Total Downloads

1.0K

Supported Platforms

linux-64
macOS-64