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bioconductor-biocio

Community

Standard Input and Output for Bioconductor Packages

Installation

To install this package, run one of the following:

Conda
$conda install seqera::bioconductor-biocio

Usage Tracking

1.4.0
1 / 8 versions selected
Downloads (Last 6 months): 0

Description

Implements import() and export() standard generics for importing and exporting biological data formats. import() supports whole-file as well as chunk-wise iterative import. The import() interface optionally provides a standard mechanism for 'lazy' access via filter() (on row or element-like components of the file resource), select() (on column-like components of the file resource) and collect(). The import() interface optionally provides transparent access to remote (e.g. via https) as well as local access. Developers can register a file extension, e.g., .loom for dispatch from character-based URIs to specific import() / export() methods based on classes representing file types, e.g., LoomFile().

About

Summary

Standard Input and Output for Bioconductor Packages

Last Updated

Nov 14, 2022 at 09:59

License

Artistic-2.0

Supported Platforms

noarch