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r-nam

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Designed for association studies in nested association mapping (NAM) panels, experimental and random panels. The method is described by Xavier et al. (2015) <doi:10.1093/bioinformatics/btv448>. It includes tools for genome-wide associations of multiple populations, marker quality control, population genetics analysis, genome-wide prediction, solving mixed models and finding variance components through likelihood and Bayesian methods.

Installation

To install this package, run one of the following:

Conda
$conda install r_test::r-nam

Usage Tracking

1.7.2
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Downloads (Last 6 months): 0

About

Summary

Designed for association studies in nested association mapping (NAM) panels, experimental and random panels. The method is described by Xavier et al. (2015) <doi:10.1093/bioinformatics/btv448>. It includes tools for genome-wide associations of multiple populations, marker quality control, population genetics analysis, genome-wide prediction, solving mixed models and finding variance components through likelihood and Bayesian methods.

Last Updated

Dec 13, 2019 at 20:34

License

GPL-3

Total Downloads

36

Supported Platforms

linux-64
macOS-64
win-64