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r-pipegs

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Code for various permutation p-values estimation methods for gene set test. The description of corresponding methods can be found in the dissertation of Yu He(2016) "Efficient permutation P-value estimation for gene set tests" <https://searchworks.stanford.edu/view/11849351>. One of the methods also corresponds to the paper "Permutation p-value approximation via generalized Stolarsky invariance" <arXiv:1603.02757>.

Installation

To install this package, run one of the following:

Conda
$conda install r::r-pipegs

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About

Summary

Code for various permutation p-values estimation methods for gene set test. The description of corresponding methods can be found in the dissertation of Yu He(2016) "Efficient permutation P-value estimation for gene set tests" <https://searchworks.stanford.edu/view/11849351>. One of the methods also corresponds to the paper "Permutation p-value approximation via generalized Stolarsky invariance" <arXiv:1603.02757>.

Last Updated

Oct 15, 2019 at 15:06

License

GPL-2

Total Downloads

269

Supported Platforms

noarch