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vsnp

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vSNP - bacterial validation SNP analysis tool

Installation

To install this package, run one of the following:

Conda
$conda install olcbioinformatics::vsnp

Usage Tracking

0.0.20
0.0.19
0.0.18
0.0.17
0.0.16
5 / 8 versions selected
Downloads (Last 6 months): 0

Description

USDA APHIS Veterinary Services (VS) Mycobacterium tuberculosis complex, mainly M. bovis, and Brucella sp. SNP pipeline. Genotyping from whole genome sequence (WGS) outputting BAM, VCF, SNP tables and phylogentic trees.

About

Summary

vSNP - bacterial validation SNP analysis tool

Last Updated

Jul 4, 2019 at 14:43

Total Downloads

149

Supported Platforms

noarch