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hivmmer

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An alignment and variant-calling pipeline for Illumina deep sequencing of HIV-1, based on the probabilistic aligner HMMER.

Installation

To install this package, run one of the following:

Conda
$conda install kantorlab::hivmmer

Usage Tracking

0.2.1
0.2.0
0.1.3
0.1.2
0.1.1
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About

Summary

An alignment and variant-calling pipeline for Illumina deep sequencing of HIV-1, based on the probabilistic aligner HMMER.

Last Updated

May 19, 2020 at 00:22

License

BSD-like

Total Downloads

140

Supported Platforms

linux-64