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hg19-coding-exons-gencode-v1

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Exon Coding Features. Exons that overlap coding regions in protein coding genes. Features are from the comprehensive set of gene annotations created on GRCh38 and mapped to GRCh37 by GENCODE (v34lift37). All other features, including non-coding exon features and non-protein coding exon features, have been removed. Some annotations were obtained from GENCODE v19 when mapping failed. Scaffoldings, assenbly patches, and alternative loci are NOT included. Features include: exon (exons that overlap coding regions in protein coding genes). Remapped from Ensembl GRCh37 to UCSC hg19

Installation

To install this package, run one of the following:

Conda
$conda install ggd-genomics::hg19-coding-exons-gencode-v1

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Summary

Exon Coding Features. Exons that overlap coding regions in protein coding genes. Features are from the comprehensive set of gene annotations created on GRCh38 and mapped to GRCh37 by GENCODE (v34lift37). All other features, including non-coding exon features and non-protein coding exon features, have been removed. Some annotations were obtained from GENCODE v19 when mapping failed. Scaffoldings, assenbly patches, and alternative loci are NOT included. Features include: exon (exons that overlap coding regions in protein coding genes). Remapped from Ensembl GRCh37 to UCSC hg19

Last Updated

Sep 6, 2020 at 01:57

Total Downloads

17

Supported Platforms

noarch