Preprocessing pipeline for cleaning metagenomes sequenced on Illumina HiSeq. Steps are: (1) index trimming, low-quality discarding, and removing of short reads; (2) host contaminants removal; (3) splitting and sorting of reads into R1, R2, and UN sets of reads.
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Summary
Preprocessing pipeline for cleaning metagenomes sequenced on Illumina HiSeq. Steps are: (1) index trimming, low-quality discarding, and removing of short reads; (2) host contaminants removal; (3) splitting and sorting of reads into R1, R2, and UN sets of reads.
Last Updated
Mar 25, 2020 at 14:37
License
MIT License
Total Downloads
308
Supported Platforms