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bioconductor-hdf5array

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HDF5 backend for DelayedArray objects

Installation

To install this package, run one of the following:

Conda
$conda install dnachun::bioconductor-hdf5array

Usage Tracking

1.34.0
1.30.0
2 / 8 versions selected
Downloads (Last 6 months): 0

Description

'Implement the HDF5Array, H5SparseMatrix, H5ADMatrix, and TENxMatrix classes, 4 convenient and memory-efficient array-like containers for representing and manipulating either: (1) a conventional (a.k.a. dense) HDF5 dataset, (2) an HDF5 sparse matrix (stored in CSR/CSC/Yale format), (3) the central matrix of an h5ad file (or any matrix in the /layers group), or (4) a 10x Genomics sparse matrix. All these containers are DelayedArray extensions and thus support all operations (delayed or block-processed) supported by DelayedArray objects.'

About

Summary

HDF5 backend for DelayedArray objects

Last Updated

Jan 26, 2025 at 21:15

License

Artistic-2.0

Total Downloads

44

Supported Platforms

macOS-arm64