readdy
Python / C++ based particle reaction-diffusion simulator
Python / C++ based particle reaction-diffusion simulator
To install this package, run one of the following:
ReaDDy (standing for [Rea]ction [D]iffusion [Dy]namics) is a particle based reaction-diffusion simulator that can be configured and run with Python 3.6+. The Python interface wraps around a C++ implementation for good performance. Trajectories are written using the flexible HDF5 format.
Summary
Python / C++ based particle reaction-diffusion simulator
Last Updated
Mar 29, 2026 at 15:43
License
BSD-3-Clause
Supported Platforms
GitHub Repository
https://github.com/readdy/readdyDocumentation
https://readdy.github.io/