Provides quality control (QC), normalization, and batch effect correction operations for 'NanoString nCounter' data, Talhouk et al. (2016) <doi:10.1371/journal.pone.0153844>. Various metrics are used to determine which samples passed or failed QC. Gene expression should first be normalized to housekeeping genes, before a reference-based approach is used to adjust for batch effects. Raw NanoString data can be imported in the form of Reporter Code Count (RCC) files.
| Name | Type | Version | Platform | Labels | Updated | Size | Downloads | Actions |
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noarch/r-nanostringr-0.6.1-r45hc72bb7e_1.conda | conda | 0.6.1 | noarch | main | Oct 3, 2025, 12:45 AM | 568.37 KB | 279 | |
noarch/r-nanostringr-0.6.1-r44hc72bb7e_1.conda | conda | 0.6.1 | noarch | main | Oct 3, 2025, 12:45 AM | 567.89 KB | 276 | |
noarch/r-nanostringr-0.6.1-r44hc72bb7e_0.conda | conda | 0.6.1 | noarch | main | May 6, 2025, 12:31 AM | 568.45 KB | 559 | |
noarch/r-nanostringr-0.6.1-r43hc72bb7e_0.conda | conda | 0.6.1 | noarch | main | May 6, 2025, 12:31 AM | 575.82 KB | 555 | |
noarch/r-nanostringr-0.6.0-r43hc72bb7e_0.conda | conda | 0.6.0 | noarch | main | Apr 26, 2025, 08:15 AM | 578.59 KB | 534 | |
noarch/r-nanostringr-0.6.0-r44hc72bb7e_0.conda | conda | 0.6.0 | noarch | main | Apr 26, 2025, 08:15 AM | 572.98 KB | 556 | |
noarch/r-nanostringr-0.5.0-r44hc72bb7e_0.conda | conda | 0.5.0 | noarch | main | Feb 5, 2025, 08:48 PM | 567.98 KB | 1.4K | |
noarch/r-nanostringr-0.5.0-r43hc72bb7e_0.conda | conda | 0.5.0 | noarch | main | Feb 5, 2025, 08:48 PM | 574.58 KB | 1.4K | |
noarch/r-nanostringr-0.4.2-r44hc72bb7e_1.conda | conda | 0.4.2 | noarch | main | Aug 10, 2024, 05:00 AM | 571.08 KB | 1.3K | |
noarch/r-nanostringr-0.4.2-r43hc72bb7e_1.conda | conda | 0.4.2 | noarch | main | Aug 10, 2024, 05:00 AM | 577.43 KB | 1.3K | |
noarch/r-nanostringr-0.4.2-r42hc72bb7e_0.conda | conda | 0.4.2 | noarch | main | Jun 12, 2024, 02:08 AM | 575.5 KB | 1.4K | |
noarch/r-nanostringr-0.4.2-r43hc72bb7e_0.conda | conda | 0.4.2 | noarch | main | Jun 12, 2024, 02:06 AM | 575.44 KB | 1.4K | |
noarch/r-nanostringr-0.4.1-r42hc72bb7e_0.conda | conda | 0.4.1 | noarch | main | Aug 15, 2023, 10:08 PM | 577.62 KB | 1.6K | |
noarch/r-nanostringr-0.4.1-r43hc72bb7e_0.conda | conda | 0.4.1 | noarch | main | Aug 15, 2023, 10:07 PM | 577.73 KB | 1.6K | |
noarch/r-nanostringr-0.4.0-r42hc72bb7e_2.conda | conda | 0.4.0 | noarch | main | Jun 25, 2023, 04:19 AM | 574.54 KB | 1.8K | |
noarch/r-nanostringr-0.4.0-r43hc72bb7e_2.conda | conda | 0.4.0 | noarch | main | Jun 25, 2023, 04:18 AM | 573.76 KB | 1.7K | |
noarch/r-nanostringr-0.4.0-r42hc72bb7e_1.tar.bz2 | conda | 0.4.0 | noarch | main | Oct 14, 2022, 08:18 AM | 605.65 KB | 2.0K | |
noarch/r-nanostringr-0.4.0-r41hc72bb7e_1.tar.bz2 | conda | 0.4.0 | noarch | main | Oct 14, 2022, 08:18 AM | 605.9 KB | 2.0K | |
noarch/r-nanostringr-0.4.0-r40hc72bb7e_0.tar.bz2 | conda | 0.4.0 | noarch | main | Aug 20, 2022, 12:56 PM | 605.77 KB | 2.2K | |
noarch/r-nanostringr-0.4.0-r41hc72bb7e_0.tar.bz2 | conda | 0.4.0 | noarch | main | Aug 20, 2022, 12:56 PM | 605.91 KB | 2.2K | |
noarch/r-nanostringr-0.3.0-r41hc72bb7e_0.tar.bz2 | conda | 0.3.0 | noarch | main | May 25, 2022, 09:32 AM | 591.55 KB | 2.6K | |
noarch/r-nanostringr-0.3.0-r40hc72bb7e_0.tar.bz2 | conda | 0.3.0 | noarch | main | May 25, 2022, 09:31 AM | 590.51 KB | 2.6K | |
noarch/r-nanostringr-0.2.0-r41hc72bb7e_0.tar.bz2 | conda | 0.2.0 | noarch | main | May 26, 2021, 03:01 PM | 309.1 KB | 2.7K | |
noarch/r-nanostringr-0.2.0-r40hc72bb7e_0.tar.bz2 | conda | 0.2.0 | noarch | main | Feb 6, 2021, 11:58 AM | 308.65 KB | 2.9K | |
noarch/r-nanostringr-0.2.0-r36hc72bb7e_0.tar.bz2 | conda | 0.2.0 | noarch | main | Feb 6, 2021, 11:57 AM | 308.73 KB | 2.9K |