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r-clustassess

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A set of tools for evaluating clustering robustness using proportion of ambiguously clustered pairs (Senbabaoglu et al. (2014) <doi:10.1038/srep06207>), as well as similarity across methods and method stability using element-centric clustering comparison (Gates et al. (2019) <doi:10.1038/s41598-019-44892-y>). Additionally, this package enables stability-based parameter assessment for graph-based clustering pipelines typical in single-cell data analysis.

Installation

To install this package, run one of the following:

Conda
$conda install conda-forge::r-clustassess

Usage Tracking

1.1.0
0.3.0
2 / 8 versions selected
Downloads (Last 6 months): 0

About

Summary

A set of tools for evaluating clustering robustness using proportion of ambiguously clustered pairs (Senbabaoglu et al. (2014) <doi:10.1038/srep06207>), as well as similarity across methods and method stability using element-centric clustering comparison (Gates et al. (2019) <doi:10.1038/s41598-019-44892-y>). Additionally, this package enables stability-based parameter assessment for graph-based clustering pipelines typical in single-cell data analysis.

Last Updated

Dec 24, 2025 at 04:48

License

MIT

Total Downloads

25.5K

Version Downloads

380

Supported Platforms

macOS-64
linux-64

Unsupported Platforms

win-64 Last supported version: 0.3.0