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r-bedmatrix

Community

A matrix-like data structure that allows for efficient, convenient, and scalable subsetting of binary genotype/phenotype files generated by PLINK (<https://www.cog-genomics.org/plink2>), the whole genome association analysis toolset, without loading the entire file into memory.

Installation

To install this package, run one of the following:

Conda
$conda install conda-forge::r-bedmatrix

Usage Tracking

2.0.4
2.0.3
2 / 8 versions selected
Downloads (Last 6 months): 0

About

Summary

A matrix-like data structure that allows for efficient, convenient, and scalable subsetting of binary genotype/phenotype files generated by PLINK (<https://www.cog-genomics.org/plink2>), the whole genome association analysis toolset, without loading the entire file into memory.

Last Updated

Jan 7, 2025 at 10:55

License

MIT

Supported Platforms

win-64
macOS-64
linux-64