trace-crispr

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TRACE: Triple-aligner Read Analysis for CRISPR Editing

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Installation

To install this package, run one of the following:

Conda

$conda install bioconda::trace-crispr

Usage Tracking

Version

2 / 8 versions selected

Downloads (Last 6 months): 0

Description

TRACE provides robust quantification of CRISPR editing outcomes including HDR, NHEJ, and large deletions using a triple-aligner consensus approach (BWA-MEM, BBMap, minimap2).

About

Summary

TRACE: Triple-aligner Read Analysis for CRISPR Editing

Last Updated

Mar 21, 2026 at 17:23

License

MIT

Total Downloads

Version Downloads

Supported Platforms

noarch

Home

https://github.com/k-roy/TRACE

GitHub Repository

https://github.com/k-roy/TRACE

Documentation

https://trace-crispr.readthedocs.io