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tafinder3d

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Toxin-antitoxin system identification with 3D structure-based searching

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::tafinder3d

Usage Tracking

1.0.7
1 / 8 versions selected
Downloads (Last 6 months): 0

Description

TAfinder3D identifies Types I-VIII toxin-antitoxin loci in bacterial genomes using sequence homology (MMseqs2), domain detection (HMMER), and 3D structure-based searching (Foldseek with GPU acceleration).

About

Summary

Toxin-antitoxin system identification with 3D structure-based searching

Last Updated

Mar 24, 2026 at 18:58

License

MIT

Total Downloads

25

Version Downloads

25

Supported Platforms

noarch