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r-taxonomizr

Community

Functions for assigning taxonomy to NCBI accession numbers and taxon IDs based on NCBI's accession2taxid and taxdump files. This package allows the user to downloads NCBI data dumps and create a local database for fast and local taxonomic assignment.

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::r-taxonomizr

Usage Tracking

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About

Summary

Functions for assigning taxonomy to NCBI accession numbers and taxon IDs based on NCBI's accession2taxid and taxdump files. This package allows the user to downloads NCBI data dumps and create a local database for fast and local taxonomic assignment.

Last Updated

Apr 27, 2021 at 07:44

License

GPL (>=2)

Total Downloads

18.5K

Supported Platforms

linux-64
macOS-64