r-rphast

Community

Provides an R interface to the 'PHAST'(<http://compgen.cshl.edu/phast/>) software (Phylogenetic Analysis with Space/Time Models). It can be used for many types of analysis in comparative and evolutionary genomics, such as estimating models of evolution from sequence data, scoring alignments for conservation or acceleration, and predicting elements based on conservation or custom phylogenetic hidden Markov models. It can also perform many basic operations on multiple sequence alignments and phylogenetic trees.

linux-64/r-rphast-1.6.11-r45hb7dc0eb_1.conda

conda

1.6.11

linux-64

main

Nov 25, 2025, 09:12 PM

2.5 MB

linux-aarch64/r-rphast-1.6.11-r45hcc37cb1_1.conda

conda

1.6.11

linux-aarch64

main

Nov 25, 2025, 09:11 PM

2.51 MB

osx-64/r-rphast-1.6.11-r45h850ccfe_0.tar.bz2

conda

1.6.11

osx-64

main

Jul 8, 2025, 04:35 AM

2.52 MB

linux-64/r-rphast-1.6.11-r45hb7dc0eb_0.tar.bz2

conda

1.6.11

linux-64

main

Jul 8, 2025, 04:34 AM

2.61 MB

osx-64/r-rphast-1.6.9-r42h90a4f21_9.tar.bz2

conda

1.6.9

osx-64

main

May 18, 2023, 09:06 PM

2.59 MB

1.5K

linux-64/r-rphast-1.6.9-r42hd0ea4ef_9.tar.bz2

conda

1.6.9

linux-64

main

May 18, 2023, 11:47 AM

2.65 MB

428

linux-64/r-rphast-1.6.9-r42hbf250df_8.tar.bz2

conda

1.6.9

linux-64

main

Nov 6, 2022, 12:34 AM

2.61 MB

220

osx-64/r-rphast-1.6.9-r42h00a8a7a_8.tar.bz2

conda

1.6.9

osx-64

main

Nov 5, 2022, 04:36 PM

2.57 MB

439

osx-64/r-rphast-1.6.9-r41h5aaf88b_7.tar.bz2

conda

1.6.9

osx-64

main

Feb 24, 2022, 11:51 AM

2.57 MB

linux-64/r-rphast-1.6.9-r41h73dbb54_7.tar.bz2

conda

1.6.9

linux-64

main

Feb 24, 2022, 01:36 AM

2.61 MB

246

linux-64/r-rphast-1.6.9-r41hdf9a8c9_6.tar.bz2

conda

1.6.9

linux-64

main

Jun 2, 2021, 06:20 PM

2.64 MB

261

osx-64/r-rphast-1.6.9-r41h9e43be8_6.tar.bz2

conda

1.6.9

osx-64

main

Jun 2, 2021, 03:38 PM

2.55 MB

969

linux-64/r-rphast-1.6.9-r40hdf9a8c9_5.tar.bz2

conda

1.6.9

linux-64

main

Mar 26, 2021, 07:38 AM

2.7 MB

283

osx-64/r-rphast-1.6.9-r40h9e43be8_5.tar.bz2

conda

1.6.9

osx-64

main

Mar 25, 2021, 08:13 AM

2.59 MB

220

linux-64/r-rphast-1.6.9-r40hcdcec82_4.tar.bz2

conda

1.6.9

linux-64

main

May 13, 2020, 07:38 PM

2.63 MB

288

osx-64/r-rphast-1.6.9-r40h17f1fa6_4.tar.bz2

conda

1.6.9

osx-64

main

May 13, 2020, 05:11 PM

2.6 MB

677

linux-64/r-rphast-1.6.9-r40hcdcec82_3.tar.bz2

conda

1.6.9

linux-64

main

May 12, 2020, 10:44 PM

2.7 MB

283

osx-64/r-rphast-1.6.9-r40h17f1fa6_3.tar.bz2

conda

1.6.9

osx-64

main

May 12, 2020, 09:22 PM

2.55 MB

osx-64/r-rphast-1.6.9-r36h159158b_2.tar.bz2

conda

1.6.9

osx-64

main

Aug 9, 2019, 11:50 AM

2.58 MB

680

linux-64/r-rphast-1.6.9-r36hcdcec82_2.tar.bz2

conda

1.6.9

linux-64

main

Aug 9, 2019, 11:39 AM

2.61 MB

395

linux-64/r-rphast-1.6.9-r351h96ca727_1.tar.bz2

conda

1.6.9

linux-64

main

Mar 12, 2019, 12:56 PM

2.61 MB

386

osx-64/r-rphast-1.6.9-r351h46e59ec_1.tar.bz2

conda

1.6.9

osx-64

main

Mar 12, 2019, 12:51 PM

2.58 MB

203

osx-64/r-rphast-1.6.9-r351hc070d10_0.tar.bz2

conda

1.6.9

osx-64

main

Jan 27, 2019, 04:24 AM

2.5 MB

304

linux-64/r-rphast-1.6.9-r351h96ca727_0.tar.bz2

conda

1.6.9

linux-64

gcc7main

Dec 27, 2018, 04:11 AM

2.62 MB

389

osx-64/r-rphast-1.6.9-r351h46e59ec_0.tar.bz2

conda

1.6.9

osx-64

gcc7main

Dec 27, 2018, 04:07 AM

2.58 MB

180

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