r-rphast

Community

Provides an R interface to the 'PHAST'(<http://compgen.cshl.edu/phast/>) software (Phylogenetic Analysis with Space/Time Models). It can be used for many types of analysis in comparative and evolutionary genomics, such as estimating models of evolution from sequence data, scoring alignments for conservation or acceleration, and predicting elements based on conservation or custom phylogenetic hidden Markov models. It can also perform many basic operations on multiple sequence alignments and phylogenetic trees.

linux-64/r-rphast-1.6.11-r45hb7dc0eb_1.conda

conda

1.6.11

linux-64

main

Nov 25, 2025, 09:12 PM

2.5 MB

186

linux-aarch64/r-rphast-1.6.11-r45hcc37cb1_1.conda

conda

1.6.11

linux-aarch64

main

Nov 25, 2025, 09:11 PM

2.51 MB

149

osx-64/r-rphast-1.6.11-r45h850ccfe_0.tar.bz2

conda

1.6.11

osx-64

main

Jul 8, 2025, 04:35 AM

2.52 MB

linux-64/r-rphast-1.6.11-r45hb7dc0eb_0.tar.bz2

conda

1.6.11

linux-64

main

Jul 8, 2025, 04:34 AM

2.61 MB

osx-64/r-rphast-1.6.9-r42h90a4f21_9.tar.bz2

conda

1.6.9

osx-64

main

May 18, 2023, 09:06 PM

2.59 MB

1.5K

linux-64/r-rphast-1.6.9-r42hd0ea4ef_9.tar.bz2

conda

1.6.9

linux-64

main

May 18, 2023, 11:47 AM

2.65 MB

439

linux-64/r-rphast-1.6.9-r42hbf250df_8.tar.bz2

conda

1.6.9

linux-64

main

Nov 6, 2022, 12:34 AM

2.61 MB

228

osx-64/r-rphast-1.6.9-r42h00a8a7a_8.tar.bz2

conda

1.6.9

osx-64

main

Nov 5, 2022, 04:36 PM

2.57 MB

441

osx-64/r-rphast-1.6.9-r41h5aaf88b_7.tar.bz2

conda

1.6.9

osx-64

main

Feb 24, 2022, 11:51 AM

2.57 MB

linux-64/r-rphast-1.6.9-r41h73dbb54_7.tar.bz2

conda

1.6.9

linux-64

main

Feb 24, 2022, 01:36 AM

2.61 MB

253

linux-64/r-rphast-1.6.9-r41hdf9a8c9_6.tar.bz2

conda

1.6.9

linux-64

main

Jun 2, 2021, 06:20 PM

2.64 MB

267

osx-64/r-rphast-1.6.9-r41h9e43be8_6.tar.bz2

conda

1.6.9

osx-64

main

Jun 2, 2021, 03:38 PM

2.55 MB

971

linux-64/r-rphast-1.6.9-r40hdf9a8c9_5.tar.bz2

conda

1.6.9

linux-64

main

Mar 26, 2021, 07:38 AM

2.7 MB

290

osx-64/r-rphast-1.6.9-r40h9e43be8_5.tar.bz2

conda

1.6.9

osx-64

main

Mar 25, 2021, 08:13 AM

2.59 MB

223

linux-64/r-rphast-1.6.9-r40hcdcec82_4.tar.bz2

conda

1.6.9

linux-64

main

May 13, 2020, 07:38 PM

2.63 MB

296

osx-64/r-rphast-1.6.9-r40h17f1fa6_4.tar.bz2

conda

1.6.9

osx-64

main

May 13, 2020, 05:11 PM

2.6 MB

679

linux-64/r-rphast-1.6.9-r40hcdcec82_3.tar.bz2

conda

1.6.9

linux-64

main

May 12, 2020, 10:44 PM

2.7 MB

291

osx-64/r-rphast-1.6.9-r40h17f1fa6_3.tar.bz2

conda

1.6.9

osx-64

main

May 12, 2020, 09:22 PM

2.55 MB

osx-64/r-rphast-1.6.9-r36h159158b_2.tar.bz2

conda

1.6.9

osx-64

main

Aug 9, 2019, 11:50 AM

2.58 MB

682

linux-64/r-rphast-1.6.9-r36hcdcec82_2.tar.bz2

conda

1.6.9

linux-64

main

Aug 9, 2019, 11:39 AM

2.61 MB

404

linux-64/r-rphast-1.6.9-r351h96ca727_1.tar.bz2

conda

1.6.9

linux-64

main

Mar 12, 2019, 12:56 PM

2.61 MB

394

osx-64/r-rphast-1.6.9-r351h46e59ec_1.tar.bz2

conda

1.6.9

osx-64

main

Mar 12, 2019, 12:51 PM

2.58 MB

205

osx-64/r-rphast-1.6.9-r351hc070d10_0.tar.bz2

conda

1.6.9

osx-64

main

Jan 27, 2019, 04:24 AM

2.5 MB

306

linux-64/r-rphast-1.6.9-r351h96ca727_0.tar.bz2

conda

1.6.9

linux-64

gcc7main

Dec 27, 2018, 04:11 AM

2.62 MB

397

osx-64/r-rphast-1.6.9-r351h46e59ec_0.tar.bz2

conda

1.6.9

osx-64

gcc7main

Dec 27, 2018, 04:07 AM

2.58 MB

182

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