pylocuszoom
Publication-ready GWAS visualization library with regional association plots, gene tracks, eQTL, PheWAS, fine-mapping, and forest plots
Publication-ready GWAS visualization library with regional association plots, gene tracks, eQTL, PheWAS, fine-mapping, and forest plots
To install this package, run one of the following:
pyLocusZoom creates publication-quality genetic association visualizations: regional association plots with LD coloring and recombination overlays, stacked multi-GWAS comparisons, eQTL overlays, fine-mapping/SuSiE credible sets, PheWAS (phenome-wide association) plots, and forest plots for meta-analysis. Includes gene track visualization, file loaders for common formats (REGENIE, BOLT-LMM, SAIGE, GEMMA, GTEx, SuSiE, FINEMAP), and three backends: matplotlib (static/publication), plotly (interactive), and bokeh (dashboards).
Summary
Publication-ready GWAS visualization library with regional association plots, gene tracks, eQTL, PheWAS, fine-mapping, and forest plots
Last Updated
Feb 12, 2026 at 14:07
License
GPL-3.0-or-later
Total Downloads
96
Version Downloads
17
Supported Platforms
GitHub Repository
https://github.com/michael-denyer/pylocuszoom