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pylocuszoom

Community

Publication-ready GWAS visualization library with regional association plots, gene tracks, eQTL, PheWAS, fine-mapping, and forest plots

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::pylocuszoom

Usage Tracking

1.3.2
1.3.1
1.2.0
1.1.2
1.0.0
5 / 8 versions selected
Downloads (Last 6 months): 0

Description

pyLocusZoom creates publication-quality genetic association visualizations: regional association plots with LD coloring and recombination overlays, stacked multi-GWAS comparisons, eQTL overlays, fine-mapping/SuSiE credible sets, PheWAS (phenome-wide association) plots, and forest plots for meta-analysis. Includes gene track visualization, file loaders for common formats (REGENIE, BOLT-LMM, SAIGE, GEMMA, GTEx, SuSiE, FINEMAP), and three backends: matplotlib (static/publication), plotly (interactive), and bokeh (dashboards).

About

Summary

Publication-ready GWAS visualization library with regional association plots, gene tracks, eQTL, PheWAS, fine-mapping, and forest plots

Last Updated

Feb 12, 2026 at 14:07

License

GPL-3.0-or-later

Total Downloads

96

Version Downloads

17

Supported Platforms

noarch