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pretextgraph

Community

Embeds bedgraph data into Pretext contact maps.

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::pretextgraph

Usage Tracking

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Downloads (Last 6 months): 0

Description

This is a tool for converting data from a bedgraph format and embedding into a Hi-C contact map in the Pretext format. The graph data can then be displayed alongside the contact map using the PretextView desktop software (https://github.com/wtsi-hpag/PretextView). See https://github.com/wtsi-hpag/PretextMap for how to generate Pretext contact maps, or search for pretextmap on bioconda.

About

Summary

Embeds bedgraph data into Pretext contact maps.

Last Updated

Apr 4, 2025 at 13:24

License

MIT

Total Downloads

18.0K

Supported Platforms

linux-64
macOS-64