pplacer

Community

Pplacer places query sequences on a fixed reference phylogenetic tree to maximize phylogenetic likelihood or posterior probability according to a reference alignment.

Versions

Installation

To install this package, run one of the following:

Conda

$conda install bioconda::pplacer

Usage Tracking

Version

4 / 8 versions selected

Downloads (Last 6 months): 0

About

Summary

Pplacer places query sequences on a fixed reference phylogenetic tree to maximize phylogenetic likelihood or posterior probability according to a reference alignment.

Last Updated

Jan 30, 2026 at 12:05

License

GPL-3.0

Total Downloads

99.5K

Version Downloads

2.6K

Supported Platforms

linux-64

linux-aarch64

macOS-arm64

Unsupported Platforms

macOS-64 Last supported version: 1.1.alpha17

Home

http://matsen.fredhutch.org/pplacer/

GitHub Repository

https://github.com/matsen/pplacer/